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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Schlundt, A."

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Search Summary

This query matches 40 Structures.

Refinements

Structure Determination Methodology

experimental (40)

Scientific Name of Source Organism

	Homo sapiens (13)
	Severe acute respiratory syndrome coronavirus 2 (11)
	Mus musculus (6)
	Escherichia coli K-12 (3)
	Saccharomyces cerevisiae (3)
	Thermosinus carboxydivorans Nor1 (3)
	synthetic construct (3)
	Saccharomyces cerevisiae RM11-1a (2)
	Severe acute respiratory syndrome coronavirus (2)
	Saccharomyces cerevisiae S288C (1)

Taxonomy

	Eukaryota (22)
	Riboviria (13)
	Bacteria (6)
	other sequences (3)

Experimental Method

	X-RAY DIFFRACTION (32)
	SOLUTION NMR (8)

Polymer Entity Type

	Protein (33)
	RNA (17)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (9)
	2.0 - 2.5 (14)
	2.5 - 3.0 (5)
	3.0 - 3.5 (3)

Release Date

	2010 - 2014 (7)
	2015 - 2019 (12)
	2020 - 2024 (21)

Enzyme Classification Name

	Transferases (7)
	Hydrolases (1)

Symmetry Type

	Asymmetric (32)
	Cyclic (1)

SCOP Classification

	All beta proteins (2)
	Alpha and beta proteins (a+b) (2)
	All alpha proteins (1)
	Artifacts (1)

AllSelected

1 to 25 of 40 Structures

Page 1 of 2

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3PDO \| pdb_00003pdo	Download File View File

Crystal Structure of HLA-DR1 with CLIP102-120

Gunther, S., Schlundt, A., Sticht, J., Roske, Y., Heinemann, U., Wiesmuller, K.-H., Jung, G., Falk, K., Rotzschke, O., Freund, C.

(2010) Proc Natl Acad Sci U S A 107: 22219-22224

Released	2010-12-08
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	HLA class II histocompatibility antigen gamma chain (protein) HLA class II histocompatibility antigen, DR alpha chain (protein) HLA class II histocompatibility antigen, DRB1-1 beta chain (protein)
Unique Ligands	FMT, GOL

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3PGC \| pdb_00003pgc	Download File View File

Crystal Structure of HLA-DR1 with CLIP106-120, flipped peptide orientation

Gunther, S., Schlundt, A., Sticht, J., Roske, Y., Heinemann, U., Wiesmuller, K.-H., Jung, G., Falk, K., Rotzschke, O., Freund, C.

(2010) Proc Natl Acad Sci U S A 107: 22219-22224

Released	2010-12-08
Method	X-RAY DIFFRACTION 2.66 Å
Organisms	Homo sapiens
Macromolecule	HLA class II histocompatibility antigen gamma chain (protein) HLA class II histocompatibility antigen, DR alpha chain (protein) HLA class II histocompatibility antigen, DRB1-1 beta chain (protein)
Unique Ligands	GOL, PEG

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3PGD \| pdb_00003pgd	Download File View File

Crystal Structure of HLA-DR1 with CLIP106-120, canonical peptide orientation

Gunther, S., Schlundt, A., Sticht, J., Roske, Y., Heinemann, U., Wiesmuller, K.-H., Jung, G., Falk, K., Rotzschke, O., Freund, C.

(2010) Proc Natl Acad Sci U S A 107: 22219-22224

Released	2010-12-08
Method	X-RAY DIFFRACTION 2.72 Å
Organisms	Homo sapiens
Macromolecule	HLA class II histocompatibility antigen gamma chain (protein) HLA class II histocompatibility antigen, DR alpha chain (protein) HLA class II histocompatibility antigen, DRB1-1 beta chain (protein)

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4AEN \| pdb_00004aen	Download File View File

HLA-DR1 with covalently linked CLIP106-120 in reversed orientation

Schlundt, A., Guenther, S., Sticht, J., Wieczorek, M., Roske, Y., Heinemann, U., Freund, C.

(2012) J Mol Biology 423: 294

Released	2012-08-01
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	HLA CLASS II HISTOCOMPATIBILITY ANTIGEN GAMMA CHAIN (protein) HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN (protein) HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DRB1-1 BETA CHAIN (protein)
Unique Ligands	GOL

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4AH2 \| pdb_00004ah2	Download File View File

HLA-DR1 with covalently linked CLIP106-120 in canonical orientation

Schlundt, A., Guenther, S., Sticht, J., Wieczorek, M., Roske, Y., Heinemann, U., Freund, C.

(2012) J Mol Biology 423: 294

Released	2012-08-01
Method	X-RAY DIFFRACTION 2.36 Å
Organisms	Homo sapiens
Macromolecule	HLA CLASS II HISTOCOMPATIBILITY ANTIGEN GAMMA CHAIN, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN\,DRB1-1 BETA CHAIN (protein) HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN (protein)
Unique Ligands	GOL

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4QI0 \| pdb_00004qi0	Download File View File

X-ray structure of the ROQ domain from murine Roquin-1

Janowski, R., Schlundt, A., Sattler, M., Niessing, D.

(2014) Nat Struct Mol Biol 21: 671-678

Released	2014-07-16
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Mus musculus
Macromolecule	Roquin-1 (protein)
Unique Ligands	EDO

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4QI2 \| pdb_00004qi2	Download File View File

X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNA

Janowski, R., Schlundt, A., Sattler, M., Niessing, D.

(2014) Nat Struct Mol Biol 21: 671-678

Released	2014-07-16
Method	X-RAY DIFFRACTION 3 Å
Organisms	Mus musculus
Macromolecule	Roquin-1 (protein) RNA (5'-R(APCPAPUPGPUPUPUPUPCPUPGPUPGPAPAPAPAPCPGPGPAP*G)-3') (nucleic acid)

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5F5F \| pdb_00005f5f	Download File View File

X-ray structure of Roquin ROQ domain in complex with a Selex-derived hexa-loop RNA motif

Janowski, R., Schlundt, A., Sattler, M., Niessing, D.

(2016) Nat Commun 7: 11032-11032

Released	2016-04-06
Method	X-RAY DIFFRACTION 3 Å
Organisms	Mus musculus
Macromolecule	Roquin-1 (protein) RNA (5'-R(PUPGPAPCPUPGPCPGPUPUPUPUPAPGPGPAPGPUPUPA)-3') (nucleic acid)

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5F5H \| pdb_00005f5h	Download File View File

X-ray structure of Roquin ROQ domain in complex with Ox40 hexa-loop RNA motif

Janowski, R., Schlundt, A., Sattler, M., Niessing, D.

(2016) Nat Commun 7: 11032-11032

Released	2016-04-06
Method	X-RAY DIFFRACTION 2.23 Å
Organisms	Mus musculus
Macromolecule	Roquin-1 (protein) RNA (5'-R(PCPCPAPCPAPCPCPGPUPUPCPUPAPGPGPUPGPCPUPGP*G)-3') (nucleic acid)
Unique Ligands	GOL

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5JU7 \| pdb_00005ju7	Download File View File

DNA BINDING DOMAIN OF E.COLI CADC

Janowski, R., Schlundt, A., Sattler, M., Niessing, D.

(2017) Sci Rep 7: 1051-1051

Released	2017-04-26
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Escherichia coli K-12
Macromolecule	Transcriptional activator CadC (protein)
Unique Ligands	ZN

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5M0H \| pdb_00005m0h	Download File View File

Crystal structure of the central flexible region of ASH1 mRNA E3-localization element

Edelmann, F.T., Janowski, R., Niessing, D.

(2017) Nat Struct Mol Biol 24: 152-161

Released	2017-01-18
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ASH1 E3 (42 nt-TL/TLR) (nucleic acid)
Unique Ligands	SO4

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5M0I \| pdb_00005m0i	Download File View File

Crystal structure of the nuclear complex with She2p and the ASH1 mRNA E3-localization element

Edelmann, F.T., Janowski, R., Niessing, D.

(2017) Nat Struct Mol Biol 24: 152-161

Released	2017-01-18
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae RM11-1a Saccharomyces cerevisiae S288C
Macromolecule	SWI5-dependent HO expression protein 2 (protein) SWI5-dependent HO expression protein 3 (protein) ASH1-E3 element, RNA (28-MER) (nucleic acid)
Unique Ligands	ACT, EDO, MG

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5M0J \| pdb_00005m0j	Download File View File

Crystal structure of the cytoplasmic complex with She2p, She3p, and the ASH1 mRNA E3-localization element

Edelmann, F.T., Janowski, R., Niessing, D.

(2017) Nat Struct Mol Biol 24: 152-161

Released	2017-01-18
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae RM11-1a
Macromolecule	SWI5-dependent HO expression protein 2,SWI5-dependent HO expression protein 3 (protein) ASH1 E3 (28 nt-loop) (nucleic acid)
Unique Ligands	MG

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6G2K \| pdb_00006g2k	Download File View File

Structure of HuR RRM3 in complex with RNA (UUUUUU)

Pabis, M., Sattler, M.

(2019) Nucleic Acids Res 47: 1011-1029

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	ELAV-like protein 1 (protein) RNA (5'-R(PUPUPUPUPUPU)-3') (nucleic acid)
Unique Ligands	SO4

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6GD1 \| pdb_00006gd1	Download File View File

Structure of HuR RRM3

Pabis, M., Sattler, M.

(2019) Nucleic Acids Res 47: 1011-1029

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Escherichia coli K-12 Homo sapiens
Macromolecule	Thioredoxin 1,ELAV-like protein 1 (protein)
Unique Ligands	NA

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6GD2 \| pdb_00006gd2	Download File View File

Structure of HuR RRM3 in complex with RNA

Pabis, M., Sattler, M.

(2019) Nucleic Acids Res 47: 1011-1029

Released	2018-10-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	ELAV-like protein 1 (protein) RNA (5'-R(PUPUPUPAPUPUP*U)-3') (nucleic acid)

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6GD3 \| pdb_00006gd3	Download File View File

Structure of HuR RRM3 in complex with RNA (UAUUUA)

Pabis, M., Sattler, M.

(2019) Nucleic Acids Res 47: 1011-1029

Released	2018-10-31
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	ELAV-like protein 1 (protein) RNA (5'-R(PUPAPUPUPUPA)-3') (nucleic acid)
Unique Ligands	NA

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6GQE \| pdb_00006gqe	Download File View File

X-ray structure of KH1-2 domain of IMP3

Janowski, R., Schlundt, A., Sattler, M., Niessing, D.

(2019) Nat Commun 10: 2266-2266

Released	2019-04-24
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	Insulin-like growth factor 2 mRNA-binding protein 3 (protein)

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6RO1 \| pdb_00006ro1	Download File View File

X-ray crystal structure of the MTR4 NVL complex

Lingaraju, M., Langer, L.M., Basquin, J., Falk, S., Conti, E.

(2019) Nat Commun 10: 3393-3393

Released	2019-07-03
Method	X-RAY DIFFRACTION 3.07 Å
Organisms	Homo sapiens
Macromolecule	Exosome RNA helicase MTR4 (protein) Nuclear valosin-containing protein-like (protein)
Unique Ligands	ADP, CL, SO4

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6TQA \| pdb_00006tqa	Download File View File

X-ray structure of Roquin ROQ domain in complex with a UCP3 CDE2 SL RNA motif

Binas, O., Tants, J.-N., Peter, S.A., Janowski, R., Davydova, E., Braun, J., Niessing, D., Schwalbe, H., Weigand, J.E., Schlundt, A.

(2020) Nucleic Acids Res 48: 7385-7403

Released	2020-05-27
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mus musculus
Macromolecule	Roquin-1 (protein) RNA (5'-R(PGPGPUPGPCPCPUPAPAPUPAPUPUPUPAPGPGPCPAPCP*(CCC))-3') (nucleic acid)
Unique Ligands	CL, MG

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6TQB \| pdb_00006tqb	Download File View File

X-ray structure of Roquin ROQ domain in complex with a UCP3 CDE1 SL RNA motif

Binas, O., Tants, J.-N., Peter, S.A., Janowski, R., Davydova, E., Braun, J., Niessing, D., Schwalbe, H., Weigand, J.E., Schlundt, A.

(2020) Nucleic Acids Res 48: 7385-7403

Released	2020-05-27
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Mus musculus
Macromolecule	Roquin-1 (protein) RNA (5'-R(PGPGPAPAPAPUPUPAPUPAPUPUPAPAPUPUPUPCP*C)-3') (nucleic acid)
Unique Ligands	CL, EDO, MG, NA

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6XWJ \| pdb_00006xwj	Download File View File

Constitutive decay element CDE2 from human 3'UTR

Schwalbe, H., Binas, O.

(2020) Nucleic Acids Res 48: 7385-7403

Released	2020-05-27
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	RNA (5'-R(GPGPUPGPCPCPUPAPAPUPAPUPUPUPAPGPGPCPAPCP*C)-3') (nucleic acid)