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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Verma, C.S."

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Search Summary

This query matches 56 Structures.

Refinements

Structure Determination Methodology

experimental (56)

Scientific Name of Source Organism

	Homo sapiens (31)
	Thermomyces lanuginosus (5)
	synthetic construct (5)
	Nitratidesulfovibrio vulgaris str. Hildenborough (3)
	dengue virus type 3 (3)
	Dosidicus gigas (2)
	Lysinibacillus sphaericus (2)
	Nitratidesulfovibrio vulgaris (2)
	Zoarces americanus (2)
	Bacillus subtilis (1)

More...

Taxonomy

	Eukaryota (41)
	Bacteria (15)
	other sequences (5)
	Riboviria (3)
	Monodnaviria (1)
	unclassified bacterial viruses (1)

Experimental Method

	X-RAY DIFFRACTION (48)
	SOLUTION NMR (5)
	ELECTRON MICROSCOPY (3)

Polymer Entity Type

Protein (56)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (18)
	2.0 - 2.5 (18)
	2.5 - 3.0 (7)
	3.0 - 3.5 (1)
	> 4.5 (3)

Release Date

	1995 - 1999 (8)
	2000 - 2004 (13)
	2005 - 2009 (3)
	2010 - 2014 (3)
	2015 - 2019 (20)
	2020 - 2024 (9)

Enzyme Classification Name

	Hydrolases (12)
	Lyases (1)
	Transferases (6)
	Ligases (2)
	Oxidoreductases (1)

Membrane Protein Annotation

OPM (2)

Symmetry Type

	Asymmetric (42)
	Dihedral (9)
	Cyclic (4)
	Icosahedral (3)

SCOP Classification

	Alpha and beta proteins (a/b) (15)
	Small proteins (3)
	Alpha and beta proteins (a+b) (5)
	All alpha proteins (1)
	Artifacts (2)
	All beta proteins (1)

AllSelected

1 to 25 of 56 Structures

Page 1 of 3

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1AKQ \| pdb_00001akq	Download File View File

D95A OXIDIZED FLAVODOXIN MUTANT FROM D. VULGARIS

Mccarthy, A., Walsh, M., Higgins, T.

(2002) Biochemistry 41: 10950-10962

Released	1998-12-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Nitratidesulfovibrio vulgaris str. Hildenborough
Macromolecule	FLAVODOXIN (protein)
Unique Ligands	FMN

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1AKU \| pdb_00001aku	Download File View File

D95A HYDROQUINONE FLAVODOXIN MUTANT FROM D. VULGARIS

Mccarthy, A., Walsh, M., Higgins, T.

(2002) Biochemistry 41: 10950-10962

Released	1998-12-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Nitratidesulfovibrio vulgaris str. Hildenborough
Macromolecule	FLAVODOXIN (protein)
Unique Ligands	FMN, SO4

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1AKV \| pdb_00001akv	Download File View File

D95A SEMIQUINONE FLAVODOXIN MUTANT FROM D. VULGARIS

Mccarthy, A., Walsh, M., Higgins, T.

(2002) Biochemistry 41: 10950-10962

Released	1998-12-02
Method	X-RAY DIFFRACTION 2 Å
Organisms	Nitratidesulfovibrio vulgaris str. Hildenborough
Macromolecule	FLAVODOXIN (protein)
Unique Ligands	FMN, SO4

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1C7E \| pdb_00001c7e	Download File View File

D95E HYDROQUINONE FLAVODOXIN MUTANT FROM D. VULGARIS

McCarthy, A., Walsh, M., Higgins, T., D'Arcy, D.

(2002) Biochemistry 41: 10950-10962

Released	2000-08-23
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Nitratidesulfovibrio vulgaris
Macromolecule	FLAVODOXIN (protein)
Unique Ligands	FMN

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1C7F \| pdb_00001c7f	Download File View File

D95E OXIDIZED FLAVODOXIN MUTANT FROM D. VULGARIS

McCarthy, A., Walsh, M., Higgins, T., D'Arcy, D.

(2002) Biochemistry 41: 10950-10962

Released	2000-08-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Nitratidesulfovibrio vulgaris
Macromolecule	FLAVODOXIN (protein)
Unique Ligands	FMN

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1DT3 \| pdb_00001dt3	Download File View File

THE STRUCTURAL ORIGINS OF INTERFACIAL ACTIVATION IN THERMOMYCES (HUMICOLA) LANUGINOSA LIPASE

Brozozowski, A.M., Savage, H.

(2000) Biochemistry 39: 15071-15082

Released	2000-12-20
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Thermomyces lanuginosus
Macromolecule	LIPASE (protein)

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1DT5 \| pdb_00001dt5	Download File View File

THE STRUCTURAL ORIGINS OF INTERFACIAL ACTIVATION IN THERMOMYCES (HUMICOLA) LANUGINOSA LIPASE

Brozozowski, A.M., Savage, H.

(2000) Biochemistry 39: 15071-15082

Released	2000-12-20
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Thermomyces lanuginosus
Macromolecule	LIPASE (protein)

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1DTE \| pdb_00001dte	Download File View File

THE STRUCTURAL ORIGINS OF INTERFACIAL ACTIVATION IN THERMOMYCES (HUMICOLA) LANUGINOSA LIPASE

Brozozowski, A.M., Savage, H.

(2000) Biochemistry 39: 15071-15082

Released	2000-12-20
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Thermomyces lanuginosus
Macromolecule	LIPASE (protein)

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1DU4 \| pdb_00001du4	Download File View File

THE STRUCTURAL ORIGINS OF INTERFACIAL ACTIVATION IN THERMOMYCES (HUMICOLA) LANUGINOSA LIPASE OTHER STRUCTURE DETAILS

Brozozowski, A.M., Savage, H.

(2000) Biochemistry 39: 15071-15082

Released	2000-12-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Thermomyces lanuginosus
Macromolecule	LIPASE (protein)

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1E3A \| pdb_00001e3a	Download File View File

A slow processing precursor penicillin acylase from Escherichia coli

Hewitt, L., Kasche, V., Lummer, K., Lewis, R.J., Murshudov, G.N., Verma, C.S., Dodson, G.G., Wilson, K.S.

(2000) J Mol Biology 302: 887

Released	2000-11-29
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	PENICILLIN AMIDASE ALPHA SUBUNIT (protein) PENICILLIN AMIDASE BETA SUBUNIT (protein)
Unique Ligands	CA, CL, EDO

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1EIN \| pdb_00001ein	Download File View File

THE STRUCTURAL ORIGINS OF INTERFACIAL ACTIVATION IN THERMOMYCES (HUMICOLA) LANUGINOSA LIPASE

Brozozowski, A.M., Savage, H.

(2000) Biochemistry 39: 15071-15082

Released	2000-12-20
Method	X-RAY DIFFRACTION 3 Å
Organisms	Thermomyces lanuginosus
Macromolecule	LIPASE (protein)
Unique Ligands	PLC

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1FSE \| pdb_00001fse	Download File View File

CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS REGULATORY PROTEIN GERE

Ducros, V.M.-A., Lewis, R.J., Verma, C.S., Dodson, E.J., Leonard, G., Turkenburg, J.P., Murshudov, G.N., Wilkinson, A.J., Brannigan, J.A.

(2001) J Mol Biology 306: 759-771

Released	2001-03-21
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Bacillus subtilis
Macromolecule	GERE (protein)
Unique Ligands	GOL, SO4

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1HG7 \| pdb_00001hg7	Download File View File

High resolution structure of HPLC-12 type III antifreeze protein from Ocean Pout Macrozoarces americanus

Antson, A.A., Smith, D.J., Roper, D.I., Lewis, S., Caves, L.S.D., Verma, C.S., Buckley, S.L., Lillford, P.J., Hubbard, R.E.

(2001) J Mol Biology 305: 875

Released	2001-01-31
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Zoarces americanus
Macromolecule	HPLC-12 TYPE III ANTIFREEZE PROTEIN (protein)
Unique Ligands	SO4

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1O8U \| pdb_00001o8u	Download File View File

The 2 Angstrom Structure of 6-Oxo Camphor Hydrolase: New Structural Diversity in the Crotonase Superfamily

Grogan, G., Whittingham, J.L., Turkenburg, J.P., Verma, C.S., Walsh, M.A.

(2003) J Biological Chem 278: 1744

Released	2003-01-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rhodococcus erythropolis
Macromolecule	6-OXO CAMPHOR HYDROLASE (protein)
Unique Ligands	NA

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1QIY \| pdb_00001qiy	Download File View File

HUMAN INSULIN HEXAMERS WITH CHAIN B HIS MUTATED TO TYR COMPLEXED WITH PHENOL

Tang, L., Whittingham, J.L., Verma, C.S., Caves, L.S.D., Dodson, G.G.

(1999) Biochemistry 38: 12041

Released	1999-06-22
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	INSULIN A CHAIN (protein) INSULIN B CHAIN (protein)
Unique Ligands	CL, IPH, ZN

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1QIZ \| pdb_00001qiz	Download File View File

HUMAN INSULIN HEXAMERS WITH CHAIN B HIS MUTATED TO TYR COMPLEXED WITH RESORCINOL

Tang, L., Whittingham, J.L., Verma, C.S., Caves, L.S.D., Dodson, G.G.

(1999) Biochemistry 38: 12041

Released	1999-06-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	INSULIN A CHAIN (protein) INSULIN B CHAIN (protein)
Unique Ligands	CL, RCO, ZN

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1QJ0 \| pdb_00001qj0	Download File View File

HUMAN INSULIN HEXAMERS WITH CHAIN B HIS MUTATED TO TYR

Tang, L., Whittingham, J.L., Verma, C.S., Caves, L.S.D., Dodson, G.G.

(1999) Biochemistry 38: 12041

Released	1999-06-22
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	INSULIN A CHAIN (protein) INSULIN B CHAIN (protein)
Unique Ligands	CL, ZN

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1SML \| pdb_00001sml	Download File View File

METALLO BETA LACTAMASE L1 FROM STENOTROPHOMONAS MALTOPHILIA

Ullah, J.H., Walsh, T.R., Taylor, I.A., Emery, D.C., Verma, C.S., Gamblin, S.J., Spencer, J.

(1998) J Mol Biology 284: 125-136

Released	1999-09-20
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Stenotrophomonas maltophilia
Macromolecule	PROTEIN (PENICILLINASE) (protein)
Unique Ligands	ZN

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1SZO \| pdb_00001szo	Download File View File

Crystal Structure Analysis of the 6-Oxo Camphor Hydrolase His122Ala Mutant Bound to Its Natural Product (2S,4S)-alpha-Campholinic Acid

Leonard, P.M., Grogan, G.

(2004) J Biological Chem 279: 31312-31317

Released	2004-06-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rhodococcus sp. NCIMB 9784
Macromolecule	6-oxocamphor hydrolase (protein)
Unique Ligands	CA, CAX

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1UZ9 \| pdb_00001uz9	Download File View File

Crystallographic and solution studies of N-lithocholyl insulin: a new generation of prolonged-acting insulins.

Whittingham, J.L., Jonassen, I., Havelund, S., Roberts, S.M., Dodson, E.J., Verma, C.S., Wilkinson, A.J., Dodson, G.G.

(2004) Biochemistry 43: 5987

Released	2005-03-03
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	INSULIN (protein)
Unique Ligands	CL, CRS, UZ9, ZN

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2FYI \| pdb_00002fyi	Download File View File

Crystal Structure of the Cofactor-Binding Domain of the Cbl Transcriptional Regulator

Stec, E., Neumann, P., Wilkinson, A.J., Brzozowski, A.M., Bujacz, G.D.

(2006) J Mol Biology 364: 309-322

Released	2006-02-21
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli K-12
Macromolecule	HTH-type transcriptional regulator cbl (protein)

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2J5I \| pdb_00002j5i	Download File View File

Crystal Structure of Hydroxycinnamoyl-CoA Hydratase-Lyase

Leonard, P.M., Brzozowski, A.M., Lebedev, A., Marshall, C.M., Smith, D.J., Verma, C.S., Walton, N.J., Grogan, G.

(2006) Acta Crystallogr D Biol Crystallogr 62: 1494

Released	2006-12-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pseudomonas fluorescens
Macromolecule	P-HYDROXYCINNAMOYL COA HYDRATASE/LYASE (protein)

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2PVA \| pdb_00002pva	Download File View File

OXIDIZED PENICILLIN V ACYLASE FROM B. SPHAERICUS

Suresh, C.G., Pundle, A.V., Rao, K.N., SivaRaman, H., Brannigan, J.A., McVey, C.E., Verma, C.S., Dauter, Z., Dodson, E.J., Dodson, G.G.

(1999) Nat Struct Biol 6: 414-416

Released	2000-07-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Lysinibacillus sphaericus
Macromolecule	PENICILLIN V ACYLASE (protein)
Unique Ligands	DTD

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2W97 \| pdb_00002w97	Download File View File

Crystal Structure of eIF4E Bound to Glycerol and eIF4G1 peptide

Brown, C.J., Verma, C.S., Walkinshaw, M.D., Lane, D.P.

(2009) Cell Cycle 8: 1905-1911

Released	2010-03-31
Method	X-RAY DIFFRACTION 2.29 Å
Organisms	Homo sapiens
Macromolecule	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 (protein) EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (protein)
Unique Ligands	GOL, MGO, PGE, SO4