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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 2 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (2)

Scientific Name of Source Organism

	Drosophila melanogaster (1)
	Enterococcus faecium (1)

Taxonomy

	Bacteria (1)
	Eukaryota (1)

Experimental Method

	SOLUTION NMR (1)
	X-RAY DIFFRACTION (1)

Polymer Entity Type

	Protein (2)
	RNA (1)

Refinement Resolution (Å)

2.5 - 3.0 (1)

Release Date

2020 - 2024 (2)

Enzyme Classification Name

Hydrolases (2)

Symmetry Type

	Asymmetric (1)
	Cyclic (1)

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6KR6	Download File View File

Crystal structure of Drosophila Piwi

Yamaguchi, S., Oe, A., Yamashita, K., Hirano, S., Mastumoto, N., Ishitani, R., Nishimasu, H., Nureki, O.

(2020) Nat Commun 11: 858-858

Released	2020-02-19
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Drosophila melanogaster
Macromolecule	Protein piwi (protein) piRNA (nucleic acid)
Unique Ligands	HG, ZN

Explore in 3D

8XZ2	Download File View File

The structural model of a homodimeric D-Ala-D-Ala metallopeptidase, VanX, from vancomycin-resistant bacteria

Konuma, T., Takai, T., Tsuchiya, C., Nishida, M., Hashiba, M., Yamada, Y., Shirai, H., Motoda, Y., Nagadoi, A., Chikaishi, E., Akagi, K., Akashi, S., Yamazaki, T., Akutsu, H., Oe, A., Ikegami, T.

(2024) Protein Sci 33: e5002-e5002

Released	2024-05-22
Method	SOLUTION NMR
Organisms	Enterococcus faecium
Macromolecule	D-alanyl-D-alanine dipeptidase (protein)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

6KR6

Crystal structure of Drosophila Piwi

8XZ2

The structural model of a homodimeric D-Ala-D-Ala metallopeptidase, VanX, from vancomycin-resistant bacteria