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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "Cbei_2377"

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Search Summary

This query matches 40 Structures.

Refinements

Structure Determination Methodology

experimental (40)

Scientific Name of Source Organism

Zobellia galactanivorans (40)

Taxonomy

Bacteria (40)

Experimental Method

X-RAY DIFFRACTION (40)

Polymer Entity Type

Protein (40)

Refinement Resolution (Å)

	1.0 - 1.5 (8)
	1.5 - 2.0 (21)
	2.0 - 2.5 (9)
	2.5 - 3.0 (2)

Release Date

	2000 - 2004 (3)
	2010 - 2014 (13)
	2015 - 2019 (13)
	2020 - 2024 (11)

Enzyme Classification Name

	Hydrolases (24)
	Lyases (5)
	Oxidoreductases (5)

Symmetry Type

	Asymmetric (22)
	Cyclic (16)
	Dihedral (2)

SCOP Classification

	All beta proteins (13)
	Artifacts (7)
	Alpha and beta proteins (a/b) (3)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 25 of 40 Structures

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1O4Y	Download File View File

THE THREE-DIMENSIONAL STRUCTURE OF BETA-AGARASE A FROM ZOBELLIA GALACTANIVORANS

Allouch, J., Jam, M., Helbert, W., Barbeyron, T., Kloareg, B., Henrissat, B., Czjzek, M.

(2003) J Biological Chem 278: 47171-47180

Released	2003-12-09
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Zobellia galactanivorans
Macromolecule	beta-agarase A (protein)
Unique Ligands	CA, NA, SO4

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1O4Z	Download File View File

THE THREE-DIMENSIONAL STRUCTURE OF BETA-AGARASE B FROM ZOBELLIA GALACTANIVORANS

Allouch, J., Jam, M., Helbert, W., Barbeyron, T., Kloareg, B., Henrissat, B., Czjzek, M.

(2003) J Biological Chem 278: 47171-47180

Released	2003-12-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Zobellia galactanivorans
Macromolecule	beta-agarase B (protein)
Unique Ligands	EPE, MG, NA

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1URX	Download File View File

Crystallographic structure of beta-agarase A in complex with oligoagarose

Allouch, J., Helbert, W., Henrissat, B., Czjzek, M.

(2004) Structure 12: 623

Released	2004-03-04
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Zobellia galactanivorans
Macromolecule	BETA-AGARASE A (protein)
Unique Ligands	CA
Unique branched monosaccharides	AAL, GAL, GLA

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3ILF	Download File View File

Crystal structure of porphyranase A (PorA) in complex with neo-porphyrotetraose

Hehemann, J.H., Correc, G., Barbeyron, T., Helbert, W., Michel, G., Czjzek, M.

(2010) Nature 464: 908-912

Released	2010-04-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Zobellia galactanivorans
Macromolecule	porphyranase A (protein)
Unique Ligands	ACT, CA, CL, MG
Unique branched monosaccharides	GAL, GLA, L6S

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3JUU	Download File View File

Crystal structure of porphyranase B (PorB) from Zobellia galactanivorans

Hehemann, J.H., Correc, G., Barbeyron, T., Michel, G., Czjzek, M.

(2010) Nature 464: 908-912

Released	2010-04-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Zobellia galactanivorans
Macromolecule	porphyranase B (protein)
Unique Ligands	GOL, MES, SO4

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3P2N	Download File View File

Discovery and structural characterization of a new glycoside hydrolase family abundant in coastal waters that was annotated as 'hypothetical protein'

Rebuffet, E., Barbeyron, T., Czjzek, M., Michel, G.

(2011) Environ Microbiol 13: 1253-1270

Released	2011-03-02
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Zobellia galactanivorans
Macromolecule	3,6-anhydro-alpha-L-galactosidase (protein)
Unique Ligands	CL, ZN

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3ZPY	Download File View File

Crystal structure of the marine PL7 alginate lyase AlyA1 from Zobellia galactanivorans

Thomas, F., Jeudy, A., Michel, G., Czjzek, M.

(2013) J Biological Chem 288: 23021

Released	2013-06-26
Method	X-RAY DIFFRACTION 1.43 Å
Organisms	Zobellia galactanivorans
Macromolecule	ALGINATE LYASE, FAMILY PL7 (protein)
Unique Ligands	NA

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4ASM	Download File View File

Crystal structure of the catalytic domain of beta-agarase D from Zobellia galactanivorans

Hehemann, J.H., Correc, G., Bernard, T., Michel, G., Czjzek, M.

(2012) J Biological Chem 287: 30571

Released	2012-07-25
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Zobellia galactanivorans
Macromolecule	BETA-AGARASE D (protein)
Unique Ligands	CA, IMD, PEG

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4ATE	Download File View File

High resolution crystal structure of beta-porphyranase A from Zobellia galactanivorans

Hehemann, J.H., Correc, G., Jam, M., Michel, G., Czjzek, M.

(2012) J Biological Chem 287: 30571

Released	2012-07-25
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Zobellia galactanivorans
Macromolecule	BETA-PORPHYRANASE A (protein)
Unique Ligands	CA, CL, SO4

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4ATF	Download File View File

Crystal structure of inactivated mutant beta-agarase B in complex with agaro-octaose

Bernard, T., Hehemann, J.H., Correc, G., Jam, M., Michel, G., Czjzek, M.

(2012) J Biological Chem 287: 30571

Released	2012-07-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Zobellia galactanivorans
Macromolecule	BETA-AGARASE B (protein)
Unique Ligands	NA
Unique branched monosaccharides	AAL, GAL

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4BE3	Download File View File

crystal structure of the exolytic PL7 alginate lyase AlyA5 from Zobellia galactanivorans

Thomas, F., Jeudy, A., Michel, G., Czjzek, M.

(2013) J Biological Chem 288: 23021

Released	2013-06-26
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Zobellia galactanivorans
Macromolecule	ALGINATE LYASE, FAMILY PL7 (protein)
Unique Ligands	NA, SRT, TAR, TLA

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4BOW	Download File View File

Crystal structure of LamA_E269S from Z. galactanivorans in complex with laminaritriose and laminaritetraose

Labourel, A., Jeudy, A., Czjzek, M., Michel, G.

(2014) J Biological Chem 289: 2027

Released	2013-12-18
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Zobellia galactanivorans
Macromolecule	ENDO-1,3-BETA-GLUCANASE, FAMILY GH16 (protein)
Unique Ligands	BGC, CA, NA
Unique branched monosaccharides	BGC, GLC

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4BPZ	Download File View File

Crystal structure of lamA_E269S from Zobellia galactanivorans in complex with a trisaccharide of 1,3-1,4-beta-D-glucan.

Labourel, A., Jam, M., Jeudy, A., Czjzek, M., Michel, G.

(2014) J Biological Chem 289: 2027

Released	2013-12-18
Method	X-RAY DIFFRACTION 1.13 Å
Organisms	Zobellia galactanivorans
Macromolecule	ENDO-1,3-BETA-GLUCANASE, FAMILY GH16 (protein)
Unique Ligands	CA
Unique branched monosaccharides	BGC, GLC

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4BQ1	Download File View File

Crystal structure of of LamAcat from Zobellia galactanivorans

Labourel, A., Jam, M., Jeudy, A., Michel, G., Czjzek, M.

(2014) J Biological Chem 289: 2027

Released	2013-12-18
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Zobellia galactanivorans
Macromolecule	ENDO-1,3-BETA-GLUCANASE, FAMILY GH16 (protein)
Unique Ligands	CA, GOL

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4CIT	Download File View File

Crystal structure of the first bacterial vanadium dependant iodoperoxidase

Rebuffet, E., Delage, L., Fournier, J.B., Rzonca, J., Potin, P., Michel, G., Czjzek, M., Leblanc, C.

(2014) Appl Environ Microbiol 80: 7561

Released	2014-10-08
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Zobellia galactanivorans
Macromolecule	VANADIUM-DEPENDENT HALOPEROXIDASE (protein)
Unique Ligands	NA, VO4

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4CRQ	Download File View File

Crystal structure of the catalytic domain of the modular laminarinase ZgLamC mutant E142S

Labourel, A., Jam, M., Legentil, L., Sylla, B., Ficko-Blean, E., Hehemann, J.H., Ferrieres, V., Czjzek, M., Michel, G.

(2015) Acta Crystallogr D Biol Crystallogr 71: 173

Released	2015-01-14
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Zobellia galactanivorans
Macromolecule	ENDO-1,3-BETA-GLUCANASE, FAMILY GH16 (protein)
Unique Ligands	ACT, CA, CL, EDO, MG, NA

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4CTE	Download File View File

Crystal structure of the catalytic domain of the modular laminarinase ZgLamC mutant E142S in complex with a thio-oligosaccharide

Labourel, A., Jam, M., Legentil, L., Sylla, B., Ficko-Blean, E., Hehemann, J.H., Ferrieres, V., Czjzek, M., Michel, G.

(2015) Acta Crystallogr D Biol Crystallogr 71: 173

Released	2015-01-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Zobellia galactanivorans
Macromolecule	ENDO-1,3-BETA-GLUCANASE, FAMILY GH16 (protein)
Unique Ligands	ACT, CA, CL, EDO, GOL, NA
Unique branched monosaccharides	BGC, GS1

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4U6B	Download File View File

Zg3597, a family 117 glycoside hydrolase, produced by the marine bacterium Zobellia galactanivorans

Ficko-Blean, E.

(2015) Acta Crystallogr D Biol Crystallogr 71: 209-223

Released	2015-02-11
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Zobellia galactanivorans
Macromolecule	Conserved hypothetical lipoprotein (protein)
Unique Ligands	ACY, CA, EDO, NA, PEG

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4U6D	Download File View File

Zg3615, a family 117 glycoside hydrolase in complex with beta-3,6-anhydro-L-galactose

Ficko-Blean, E.

(2015) Acta Crystallogr D Biol Crystallogr 71: 209-223

Released	2015-02-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Zobellia galactanivorans
Macromolecule	Conserved hypothetical periplasmic protein (protein)
Unique Ligands	3DY, CA, EDO, PEG

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4USZ	Download File View File

Crystal structure of the first bacterial vanadium dependant iodoperoxidase

Rebuffet, E., Delage, L., Fournier, J.B., Rzonca, J., Potin, P., Michel, G., Czjzek, M., Leblanc, C.

(2014) Appl Environ Microbiol 80: 7561

Released	2014-10-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Zobellia galactanivorans
Macromolecule	VANADIUM-DEPENDENT HALOPEROXIDASE (protein)
Unique Ligands	NA, VO4

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5FUI	Download File View File

Crystal structure of the C-terminal CBM6 of LamC a marine laminarianse from Zobellia galactanivorans

Labourel, A., Jam, M., Legentil, L., Sylla, B., Hehemann, J.H., Ficko-Blean, E., Ferrieres, V., Czjzek, M., Michel, G.

(2016) FEBS J 283: 1863

Released	2016-03-02
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Zobellia galactanivorans
Macromolecule	ENDO-1,3-BETA-GLUCANASE, FAMILY GH16 (protein)
Unique Ligands	APY, GOL, MG

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5OCR	Download File View File

Crystal structure of the kappa-carrageenase zobellia_236 from Zobellia galactanivorans

Czjzek, M., Matard-Mann, M., Michel, G., Jeudy, A., Larocque, R.

(2017) J Biological Chem 292: 19919-19934

Released	2017-10-18
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Zobellia galactanivorans
Macromolecule	Kappa-carrageenase (protein)
Unique Ligands	GOL, MG

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5OLC	Download File View File

Crystal structure of the 3,6-anhydro-D-galactonate cycloisomerase from Zobellia galactanivorans

Michel, G., Czjzek, M., Jam, M.

(2017) Nat Commun 8: 1685-1685

Released	2017-12-06
Method	X-RAY DIFFRACTION 2.79 Å
Organisms	Zobellia galactanivorans
Macromolecule	Galactonate dehydratase (protein)
Unique Ligands	MG

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5OPQ	Download File View File

A 3,6-anhydro-D-galactosidase produced by Zobellia galactanivorans. This is an exo-lytic enzyme that hydrolyzes terminal 3,6-anhydro-D-galactose from the non-reducing end of carrageenan oligosaccharides.

Ficko-Blean, E., Michel, G., Czjzek, M.

(2017) Nat Commun 8: 1685-1685

Released	2017-11-29
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Zobellia galactanivorans
Macromolecule	3,6-anhydro-D-galactosidase (protein)
Unique Ligands	CL, MPD, TRS