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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "GROL"

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Search Summary

This query matches 67 Structures.

Refinements

Structure Determination Methodology

experimental (67)

Scientific Name of Source Organism

	Escherichia coli (43)
	Escherichia coli K-12 (13)
	Escherichia coli BL21(DE3) (4)
	Hydrogenobacter thermophilus TK-6 (2)
	Rhodospirillum rubrum ATCC 11170 (2)
	Chlorobaculum tepidum TLS (1)
	Enterococcus faecium (1)
	Escherichia coli UTI89 (1)
	Homo sapiens (1)
	Xanthomonas oryzae pv. oryzae (1)

More...

Taxonomy

	Bacteria (67)
	Eukaryota (1)
	other sequences (1)

Experimental Method

	ELECTRON MICROSCOPY (47)
	X-RAY DIFFRACTION (20)

Polymer Entity Type

Protein (67)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (4)
	2.5 - 3.0 (14)
	3.0 - 3.5 (26)
	3.5 - 4.0 (9)
	4.0 - 4.5 (6)
	> 4.5 (4)

Release Date

	2005 - 2009 (8)
	2010 - 2014 (8)
	2015 - 2019 (6)
	2020 - 2024 (44)
	2025 - 2029 (1)

Enzyme Classification Name

	Isomerases (67)
	Hydrolases (3)
	Lyases (2)
	Transferases (1)

Symmetry Type

	Dihedral (34)
	Cyclic (19)
	Asymmetric (15)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	All alpha proteins (1)
	All beta proteins (2)
	Alpha and beta proteins (a+b) (1)
	Artifacts (2)

AllSelected

1 to 25 of 67 Structures

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1SS8 \| pdb_00001ss8	Download File View File

GroEL

Chaudhry, C., Horwich, A.L., Brunger, A.T., Adams, P.D.

(2004) J Mol Biology 342: 229-245

Released	2005-03-01
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Escherichia coli
Macromolecule	groEL protein (protein)

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1SVT \| pdb_00001svt	Download File View File

Crystal structure of GroEL14-GroES7-(ADP-AlFx)7

Chaudhry, C., Horwich, A.L., Brunger, A.T., Adams, P.D.

(2004) J Mol Biology 342: 229-245

Released	2005-03-01
Method	X-RAY DIFFRACTION 2.808 Å
Organisms	Escherichia coli
Macromolecule	groEL protein (protein) groES protein (protein)
Unique Ligands	ADP, AF3, K, MG

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1SX3 \| pdb_00001sx3	Download File View File

GroEL14-(ATPgammaS)14

Chaudhry, C., Horwich, A.L., Brunger, A.T., Adams, P.D.

(2004) J Mol Biology 342: 229-245

Released	2005-03-01
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	groEL protein (protein)
Unique Ligands	AGS, K, MG

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1SX4 \| pdb_00001sx4	Download File View File

GroEL-GroES-ADP7

Chaudhry, C., Horwich, A.L., Brunger, A.T., Adams, P.D.

(2004) J Mol Biology 342: 229-245

Released	2005-03-01
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia coli
Macromolecule	groEL protein (protein) groES protein (protein)
Unique Ligands	ADP, MG

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2NWC \| pdb_00002nwc	Download File View File

A 3.02 angstrom crystal structure of wild-type apo GroEL in a monoclinic space group

Kiser, P.D., Lodowski, D.T., Palczewski, K.

(2007) Acta Crystallogr Sect F Struct Biol Cryst Commun 63: 457-461

Released	2007-05-22
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Escherichia coli
Macromolecule	60 kDa chaperonin (protein)

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3C9V \| pdb_00003c9v	Download File View File

C7 Symmetrized Structure of Unliganded GroEL at 4.7 Angstrom Resolution from CryoEM

Ludtke, S.J., Baker, M.L., Chen, D.H., Song, J.L., Chuang, D., Chiu, W.

(2008) Structure 16: 441-448

Released	2008-09-02
Method	ELECTRON MICROSCOPY 4.7 Å
Organisms	Escherichia coli
Macromolecule	60 kDa chaperonin (protein)

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3CAU \| pdb_00003cau	Download File View File

D7 symmetrized structure of unliganded GroEL at 4.2 Angstrom resolution by cryoEM

Ludtke, S.J., Baker, M.L., Chen, D.H., Song, J.L., Chuang, D., Chiu, W.

(2008) Structure 16: 441-448

Released	2008-09-02
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Escherichia coli
Macromolecule	60 kDa chaperonin (protein)

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3E76 \| pdb_00003e76	Download File View File

Crystal structure of Wild-type GroEL with bound Thallium ions

Kiser, P.D., Lorimer, G.H., Palczewski, K.

(2009) Acta Crystallogr Sect F Struct Biol Cryst Commun 65: 967-971

Released	2009-08-25
Method	X-RAY DIFFRACTION 3.94 Å
Organisms	Escherichia coli UTI89
Macromolecule	60 kDa chaperonin (protein)
Unique Ligands	AGS, MG, TL

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3OSX \| pdb_00003osx	Download File View File

Crystal Structure of Apical Domain of Insecticidal GroEL from Xenorhapdus nematophila

Viswanathan, R., Arockiasamy, A.

To be published

Released	2011-10-05
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Xenorhabdus nematophila
Macromolecule	60 kDa chaperonin (protein)

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3VZ6 \| pdb_00003vz6	Download File View File

Crystal Structure Analysis of the Mini-chaperonines, variant with Gly 184 replaced with Ile and Leu 185 replaced Val and Val 186 replaced with Leu.

Saijo, S., Sato, T.

To be published

Released	2013-11-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli K-12
Macromolecule	60 kDa chaperonin (protein)

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3VZ7 \| pdb_00003vz7	Download File View File

Crystal Structure Analysis of the mini-chaperonin variant with Pro 187 Gly

Saijo, S., Sato, T.

To be published

Released	2013-11-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	60 kDa chaperonin (protein)

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3VZ8 \| pdb_00003vz8	Download File View File

Crystal Structure Analysis of the Mini-chaperonin variant with Leu 185, Val 186, Pro 187, Arg 188 and Ser 190 replaced with all Gly

Saijo, S., Sato, T.

To be published

Released	2013-11-13
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli
Macromolecule	60 kDa chaperonin (protein)

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3WVL \| pdb_00003wvl	Download File View File

Crystal structure of the football-shaped GroEL-GroES complex (GroEL: GroES2:ATP14) from Escherichia coli

Koike-Takeshita, A., Arakawa, T., Taguchi, H., Shimamura, T.

(2014) J Mol Biology 426: 3634-3641

Released	2014-09-17
Method	X-RAY DIFFRACTION 3.788 Å
Organisms	Escherichia coli K-12
Macromolecule	10 kDa chaperonin (protein) 60 kDa chaperonin (protein)
Unique Ligands	ATP, K, MG

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4KI8 \| pdb_00004ki8	Download File View File

Crystal structure of a GroEL-ADP complex in the relaxed allosteric state

Fei, X., Yang, D., LaRonde-LeBlanc, N., Lorimer, G.H.

(2013) Proc Natl Acad Sci U S A 110: E2958-E2966

Released	2013-07-17
Method	X-RAY DIFFRACTION 2.722 Å
Organisms	Escherichia coli
Macromolecule	GroEL protein (protein)
Unique Ligands	ADP, CA, K, MG, MPD

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4PKN \| pdb_00004pkn	Download File View File

Crystal structure of the football-shaped GroEL-GroES2-(ADPBeFx)14 complex containing substrate Rubisco

Fei, X., Ye, X., Laronde-Leblanc, N., Lorimer, G.H.

(2014) Proc Natl Acad Sci U S A 111: 12775-12780

Released	2014-08-20
Method	X-RAY DIFFRACTION 3.66 Å
Organisms	Escherichia coli
Macromolecule	10 kDa chaperonin (protein) 60 kDa chaperonin (protein)
Unique Ligands	ADP, BEF, K, MG

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4PKO \| pdb_00004pko	Download File View File

Crystal structure of the Football-shaped GroEL-GroES2-(ADPBeFx)14 complex

Fei, X., Ye, X., Laronde-Leblanc, N., Lorimer, G.H.

(2014) Proc Natl Acad Sci U S A 111: 12775-12780

Released	2014-08-20
Method	X-RAY DIFFRACTION 3.84 Å
Organisms	Escherichia coli
Macromolecule	10 kDa chaperonin (protein) 60 kDa chaperonin (protein)
Unique Ligands	ADP, BEF, K, MG

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4WGL \| pdb_00004wgl	Download File View File

Crystal structure of a GroEL D83A/R197A double mutant

Yang, D., Fei, X., LaRonde, N.A., Beckett, D., Lund, P.A., Lorimer, G.H.

To be published

Released	2015-09-30
Method	X-RAY DIFFRACTION 3.13 Å
Organisms	Escherichia coli K-12
Macromolecule	60 kDa chaperonin (protein)

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4WSC \| pdb_00004wsc	Download File View File

Crystal structure of a GroELK105A mutant

Lorimer, G.H., Ye, X., Fei, X., Yang, D., Corsepius, N., LaRonde, N.A.

To be published

Released	2015-11-11
Method	X-RAY DIFFRACTION 3.04 Å
Organisms	Escherichia coli K-12
Macromolecule	60 kDa chaperonin (protein)

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5DA8 \| pdb_00005da8	Download File View File

Crystal structure of chaperonin GroEL from

Chang, C., Marshall, N., Feldmann, B., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2015-10-14
Method	X-RAY DIFFRACTION 3 Å
Organisms	Chlorobaculum tepidum TLS
Macromolecule	60 kDa chaperonin (protein)
Unique Ligands	CA, MG, SO4

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5OPW \| pdb_00005opw	Download File View File

Crystal structure of the GroEL mutant A109C

Yan, X., Shi, Q., Bracher, A., Milicic, G., Singh, A.K., Hartl, F.U., Hayer-Hartl, M.

(2018) Cell 172: 605-617.e11

Released	2018-01-10
Method	X-RAY DIFFRACTION 3.19 Å
Organisms	Escherichia coli K-12
Macromolecule	60 kDa chaperonin (protein)

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5OPX \| pdb_00005opx	Download File View File

Crystal structure of the GroEL mutant A109C in complex with GroES and ADP BeF2

Yan, X., Shi, Q., Bracher, A., Milicic, G., Singh, A.K., Hartl, F.U., Hayer-Hartl, M.

(2018) Cell 172: 605-617.e11

Released	2018-01-10
Method	X-RAY DIFFRACTION 3.64 Å
Organisms	Escherichia coli K-12
Macromolecule	10 kDa chaperonin (protein) 60 kDa chaperonin (protein)
Unique Ligands	ADP, BEF, K, MG

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5W0S \| pdb_00005w0s	Download File View File

GroEL using cryoEM

Roh, S.H., Chiu, W.

(2017) Proc Natl Acad Sci U S A 114: 8259-8264

Released	2017-08-09
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Escherichia coli
Macromolecule	60 kDa chaperonin (protein)

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6KFV \| pdb_00006kfv	Download File View File

GroEL from Xanthomonas oryzae pv. oryzae

Tran, H.T., Lee, J.H., Kang, L.W.

(2019) Crystals (Basel) 9:

Released	2020-07-08
Method	X-RAY DIFFRACTION 3.22 Å
Organisms	Xanthomonas oryzae pv. oryzae
Macromolecule	60 kDa chaperonin (protein)
Unique Ligands	GOL, SO4

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7PBJ \| pdb_00007pbj	Download File View File

Cryo-EM structure of the GroEL-GroES complex with ADP bound to both rings ("wide" conformation).

Pichkur, E.B., Stanishneva-Konovalova, T.B.

(2021) Sci Rep 11: 18241-18241

Released	2021-11-24
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Escherichia coli K-12
Macromolecule	10 kDa chaperonin (protein) 60 kDa chaperonin (protein)
Unique Ligands	ADP, MG

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7PBX \| pdb_00007pbx	Download File View File

Cryo-EM structure of the GroEL-GroES complex with ADP bound to both rings ("tight" conformation).

Pichkur, E.B., Stanishneva-Konovalova, T.B.

(2021) Sci Rep 11: 18241-18241

Released	2021-11-24
Method	ELECTRON MICROSCOPY 3.43 Å
Organisms	Escherichia coli K-12
Macromolecule	10 kDa chaperonin (protein) 60 kDa chaperonin (protein)
Unique Ligands	ADP, MG

1 to 25 of 67 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1SS8 | pdb_00001ss8

1SVT | pdb_00001svt

1SX3 | pdb_00001sx3

1SX4 | pdb_00001sx4

2NWC | pdb_00002nwc

3C9V | pdb_00003c9v

3CAU | pdb_00003cau

3E76 | pdb_00003e76

3OSX | pdb_00003osx

3VZ6 | pdb_00003vz6

3VZ7 | pdb_00003vz7

3VZ8 | pdb_00003vz8

3WVL | pdb_00003wvl

4KI8 | pdb_00004ki8

4PKN | pdb_00004pkn

4PKO | pdb_00004pko

4WGL | pdb_00004wgl

4WSC | pdb_00004wsc

5DA8 | pdb_00005da8

5OPW | pdb_00005opw

5OPX | pdb_00005opx

5W0S | pdb_00005w0s

6KFV | pdb_00006kfv

7PBJ | pdb_00007pbj

7PBX | pdb_00007pbx