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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Escherichia coli 55989"

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Escherichia coli 55989 (10)
	Escherichia coli K-12 (2)
	Escherichia coli O157:H7 (1)

Taxonomy

Bacteria (10)

Experimental Method

	X-RAY DIFFRACTION (8)
	ELECTRON MICROSCOPY (1)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (2)
	2.5 - 3.0 (4)
	3.0 - 3.5 (1)
	4.0 - 4.5 (1)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (8)
	2020 - 2024 (1)

Enzyme Classification Name

	Hydrolases (2)
	Translocases (1)

Symmetry Type

	Asymmetric (6)
	Cyclic (4)

SCOP Classification

	All alpha proteins (1)
	Alpha and beta proteins (a+b) (1)
	All beta proteins (1)

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1 to 10 of 10 Structures

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3RX9	Download File View File

3D structure of SciN from an Escherichia coli Patotype

Felisberto-Rodrigues, C., Durand, E., Aschtgen, M.-S., Blangy, S., Ortiz-Lombardia, M., Douzy, B., Cambillau, C., Cascales, E.

(2011) PLoS Pathog 7: e1002386-e1002386

Released	2011-12-07
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Escherichia coli 55989
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	SO4

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5JI2	Download File View File

HslU L199Q in HslUV complex

Grant, R.A., Sauer, R.T., Schmitz, K.R., Baytshtok, V.

(2016) Structure 24: 1766-1777

Released	2016-11-30
Method	X-RAY DIFFRACTION 3.307 Å
Organisms	Escherichia coli 55989 Escherichia coli O157:H7
Macromolecule	ATP-dependent protease ATPase subunit HslU (protein) ATP-dependent protease subunit HslV (protein)
Unique Ligands	ADP, MG

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5JTM	Download File View File

The structure of chaperone SecB in complex with unstructured PhoA binding site a

Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.

(2016) Nature 537: 202-206

Released	2016-08-24
Method	SOLUTION NMR
Organisms	Escherichia coli 55989 Escherichia coli K-12
Macromolecule	Alkaline phosphatase (protein) Protein-export protein SecB (protein)

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5K9T	Download File View File

SecA-N68, a C-terminal truncation of the SecA ATPase from E. coli

Shilton, B.H., Vezina, G.C.

(2017) Sci Rep 7: 11747-11747

Released	2017-06-07
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli 55989
Macromolecule	Protein translocase subunit SecA (protein)
Unique Ligands	ADP, MG

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5M2Y	Download File View File

Structure of TssK C-terminal domain from E. coli T6SS

Cambillau, C., Nguyen, V.S., Spinelli, S., Desmyter, A., Legrand, P.

(2017) Nat Microbiol 2: 17103-17103

Released	2017-06-28
Method	X-RAY DIFFRACTION 1.61 Å
Organisms	Escherichia coli 55989
Macromolecule	TssK C (protein)

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5YCQ	Download File View File

Unique Specificity-Enhancing Factor for the AAA+ Lon Protease

Abe, Y., Shioi, S., Kita, S., Nakata, H., Maenaka, K., Kohda, D., Katayama, T., Ueda, T.

(2017) FEBS Lett 591: 3805-3816

Released	2018-04-11
Method	X-RAY DIFFRACTION 2.503 Å
Organisms	Escherichia coli 55989
Macromolecule	Heat shock protein HspQ (protein)

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6EJZ	Download File View File

Tryptophan Repressor TrpR from E.coli variant S88Y with Indole-3-acetic acid as ligand

Stiel, A.C., Shanmugaratnam, S., Herud-Sikimic, O., Juergens, G., Hocker, B.

(2021) Nature

Released	2019-02-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli 55989
Macromolecule	Trp operon repressor (protein)
Unique Ligands	EDO, IAC, SO4

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6H9N	Download File View File

Complex of the periplasmic domains of bacterial cell division proteins FtsQ and FtsB

Kureisaite-Ciziene, D., Lowe, J.

(2018) mBio 9:

Released	2018-09-05
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli 55989 Escherichia coli K-12
Macromolecule	Cell division protein FtsB (protein) Cell division protein FtsQ (protein)

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6IXH	Download File View File

Type VI secretion system membrane core complex

Yin, M., Yan, Z.

(2019) Cell Res 29: 251-253

Released	2019-01-23
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Escherichia coli 55989
Macromolecule	Type VI Secretion System TssJ (protein) Type VI Secretion System TssM (protein)