RCSB PDB: Search

3UKW	Download File View File

Mouse importin alpha: Bimax1 peptide complex

Marfori, M., Forwood, J.K., Lonhienne, T.G., Kobe, B.

(2012) Traffic 13: 532-548

Released	2012-10-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	Bimax1 peptide (protein) Importin subunit alpha-2 (protein)
Unique Ligands	BTB

3UKX	Download File View File

Mouse importin alpha: Bimax2 peptide complex

Marfori, M., Forwood, J.K., Lonhienne, T.G., Kobe, B.

(2012) Traffic 13: 532-548

Released	2012-10-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mus musculus
Macromolecule	Bimax2 peptide (protein) Importin subunit alpha-2 (protein)

4E34	Download File View File

Crystal structure of CFTR Associated Ligand (CAL) PDZ domain bound to iCAL36 (ANSRWPTSII) peptide

Amacher, J.F., Beck, T., Madden, D.R.

(2013) J Biol Chem 288: 5114-5126

Released	2012-12-26
Method	X-RAY DIFFRACTION 1.395 Å
Organisms	Homo sapiens
Macromolecule	Golgi-associated PDZ and coiled-coil motif-containing protein (protein) decameric peptide, iCAL36 (protein)
Unique Ligands	GOL

4GMX	Download File View File

Crystal structure of KPT185 in complex with CRM1-Ran-RanBP1

Sun, Q., Chook, Y.M.

(2012) Blood 120: 4621-4634

Released	2012-10-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens Saccharomyces cerevisiae
Macromolecule	Exportin-1 (protein) GTP-binding nuclear protein Ran (protein) Ran-specific GTPase-activating protein 1 (protein)
Unique Ligands	CL, EDO, GNP, GOL, K85, MG

4GPT	Download File View File

Crystal structure of KPT251 in complex with CRM1-Ran-RanBP1

Sun, Q., Chook, Y.M.

(2013) Leukemia 27: 66-74

Released	2012-09-05
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Homo sapiens Saccharomyces cerevisiae
Macromolecule	Exportin-1 (protein) GTP-binding nuclear protein Ran (protein) Ran-specific GTPase-activating protein 1 (protein)
Unique Ligands	51K, CL, EDO, GNP, GOL, MG

4NMO	Download File View File

CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(Ac-K-1)(ANSRWPTS[Ac-K]I)

(2014) PLoS One 9: e103650-e103650

Released	2014-10-01
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Golgi-associated PDZ and coiled-coil motif-containing protein (protein) iCAL36(Ac-K-1) peptide (protein)
Unique Ligands	GOL

4NMP	Download File View File

CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(Ac-K-3) (ANSRWP[Ac-K]SII)

(2014) PLoS One 9: e103650-e103650

Released	2014-10-01
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Homo sapiens
Macromolecule	Golgi-associated PDZ and coiled-coil motif-containing protein (protein) iCAL36(Ac-K-3) peptide (protein)
Unique Ligands	GOL

4NMQ	Download File View File

CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(Ac-K-4) (ANSRW[Ac-K]TSII)

(2014) PLoS One 9: e103650-e103650

Released	2014-10-01
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Golgi-associated PDZ and coiled-coil motif-containing protein (protein) iCAL36(Ac-K-4) peptide (protein)
Unique Ligands	GOL

4NMR	Download File View File

CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(Ac-K-5) (ANSR[Ac-K]PTSII)

(2014) PLoS One 9: e103650-e103650

Released	2014-10-01
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Golgi-associated PDZ and coiled-coil motif-containing protein (protein) iCAL36(Ac-K-5) peptide (protein)
Unique Ligands	GOL

4NMS	Download File View File

CFTR Associated Ligand (CAL)PDZ domain bound to peptide iCAL36(FLB-K-1) (ANSRWPTS[4-fluorobenzoic-acyl-K]I)

(2014) PLoS One 9: e103650-e103650

Released	2014-10-01
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Golgi-associated PDZ and coiled-coil motif-containing protein (protein) iCAL36(FLB-K-1) peptide (protein)
Unique Ligands	GOL

4NMT	Download File View File

CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(TFA-K-1) (ANSRWPTS[Tfa-acyl-K]I)

(2014) PLoS One 9: e103650-e103650

Released	2014-10-01
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Golgi-associated PDZ and coiled-coil motif-containing protein (protein) iCAL36(TFA-K-1) peptide (protein)
Unique Ligands	GOL

4NMV	Download File View File

CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(BRB-K-1) (ANSRWPTS[4-bromobenzoic-acyl-K]I)

(2014) PLoS One 9: e103650-e103650

Released	2014-10-01
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Golgi-associated PDZ and coiled-coil motif-containing protein (protein) iCAL36(BRB-K-1) peptide (protein)
Unique Ligands	GOL

4XPH	Download File View File

X-ray structure of Drosophila dopamine transporter with subsiteB mutations (D121G/S426M) bound to 3,4dichlorophenethylamine

Penmatsa, A., Wang, K., Gouaux, E.

(2015) Nature 521: 322-327

Released	2015-05-06
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Drosophila melanogaster Mus musculus
Macromolecule	Antibody fragment heavy chain (protein) Antibody fragment light chain (protein) Transporter (protein)
Unique Ligands	42J, CL, CLR, NA, P4G
Unique branched monosaccharides	BGC, GLC

4XPT	Download File View File

X-ray structure of Drosophila dopamine transporter with subsiteB mutations D121G/S426M and EL2 deletion of 162-201 in complex with substrate analogue 3,4 dichlorophen ethylamine

Aravind, P., Wang, K., Gouaux, E.

(2015) Nature 521: 322-327

Released	2015-05-06
Method	X-RAY DIFFRACTION 3.36 Å
Organisms	Drosophila melanogaster Mus musculus
Macromolecule	Dopamine transporter (protein) antibody fragment heavy chain (protein) antibody fragment light chain (protein)
Unique Ligands	42J, CL, CLR, NA, NAG, Y01
Unique branched monosaccharides	BGC, GLC

6XS5	Download File View File

Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-D1

(2021) Sci Adv 7: eabg4007-eabg4007

Released	2021-07-14
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	48V-DTY-ILE-ILE-ASP-THR-PRO-LEU-GLY-VAL-PHE-LEU-SER-SER-LEU-LYS-ARG (protein) Vacuolar protein sorting-associated protein 29 (protein)
Unique Ligands	FMT, GOL

6XS7	Download File View File

Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-D2

(2021) Sci Adv 7: eabg4007-eabg4007

Released	2021-07-14
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	48V-DTY-THR-THR-ILE-TYR-TRP-THR-PRO-LEU-GLY-THR-PHE-PRO-ARG-ILE-ARG (protein) Vacuolar protein sorting-associated protein 29 (protein)
Unique Ligands	FMT, GOL

6XS8	Download File View File

Crystal structure of Chaetomium thermophilum Vps29 complexed with RaPID-derived cyclic peptide RT-D3

(2021) Sci Adv 7: eabg4007-eabg4007

Released	2021-07-14
Method	X-RAY DIFFRACTION 1.95009854987 Å
Organisms	Thermochaetoides thermophila synthetic construct
Macromolecule	48V-DTY-GLY-TYR-ASP-PRO-LEU-GLY-LEU-LYS-TYR-PHE-ALA (protein) Vacuolar protein sorting-associated protein 29 (protein)

6XS9	Download File View File

Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-L1

(2021) Sci Adv 7: eabg4007-eabg4007

Released	2021-07-21
Method	X-RAY DIFFRACTION 2.69 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	48V-TYR-ILE-LYS-THR-PRO-LEU-GLY-THR-PHE-PRO-ASN-ARG-HIS-GLY (protein) Vacuolar protein sorting-associated protein 29 (protein)
Unique Ligands	GOL, MLI, O4B

6XSA	Download File View File

Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-L2

(2021) Sci Adv 7: eabg4007-eabg4007

Released	2021-07-14
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	48V-TYR-LEU-PRO-THR-ILE-THR-GLY-VAL-GLY-HIS-LEU-TRP-HIS-PRO-LEU (protein) Vacuolar protein sorting-associated protein 29 (protein)
Unique Ligands	SO4

8DNV	Download File View File

Cryo-EM structure of the human Sec61 complex in a partially-open apo state (Class 1)

(2023) Nat Chem Biol 19: 1063-1071

Released	2023-05-24
Method	ELECTRON MICROSCOPY 3.03 Å
Organisms	Homo sapiens
Macromolecule	Protein transport protein Sec61 subunit alpha isoform 1 (protein) Protein transport protein Sec61 subunit beta (protein) Protein transport protein Sec61 subunit gamma (protein)

8DNW	Download File View File

Cryo-EM structure of the human Sec61 complex in a partially-open apo state (Class 2)

(2023) Nat Chem Biol 19: 1063-1071

Released	2023-05-24
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Homo sapiens
Macromolecule	Protein transport protein Sec61 subunit alpha isoform 1 (protein) Protein transport protein Sec61 subunit beta (protein) Protein transport protein Sec61 subunit gamma (protein)

8DNX	Download File View File

Cryo-EM structure of the human Sec61 complex inhibited by cotransin

(2023) Nat Chem Biol 19: 1063-1071

Released	2023-05-24
Method	ELECTRON MICROSCOPY 2.98 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Cotransin analogue peptide inhibitor (protein) Protein transport protein Sec61 subunit alpha isoform 1 (protein) Protein transport protein Sec61 subunit beta (protein) Protein transport protein Sec61 subunit gamma (protein)

8DNY	Download File View File

Cryo-EM structure of the human Sec61 complex inhibited by decatransin

(2023) Nat Chem Biol 19: 1063-1071

Released	2023-05-24
Method	ELECTRON MICROSCOPY 2.85 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Decatransin peptide inhibitor (protein) Protein transport protein Sec61 subunit alpha isoform 1 (protein) Protein transport protein Sec61 subunit beta (protein) Protein transport protein Sec61 subunit gamma (protein)

8DNZ	Download File View File

Cryo-EM structure of the human Sec61 complex inhibited by apratoxin F

(2023) Nat Chem Biol 19: 1063-1071

Released	2023-05-24
Method	ELECTRON MICROSCOPY 2.57 Å
Organisms	Homo sapiens Moorena bouillonii
Macromolecule	Apratoxin F peptide inhibitor (protein) Protein transport protein Sec61 subunit alpha isoform 1 (protein) Protein transport protein Sec61 subunit beta (protein) Protein transport protein Sec61 subunit gamma (protein)

8DO0	Download File View File

Cryo-EM structure of the human Sec61 complex inhibited by mycolactone