4IOH | pdb_00004ioh

Crystal Structure of the Tll1086 protein from Thermosynechococcus elongatus, Northeast Structural Genomics Consortium Target TeR258

• PDB DOI: https://doi.org/10.2210/pdb4IOH/pdb

• Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
• Organism(s): Thermosynechococcus vestitus BP-1
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2013-01-07 Released: 2013-01-30 
• Deposition Author(s): Vorobiev, S., Su, M., Seetharaman, J., Maglaqui, M., Xiao, X., Kohan, E., Wang, D., Everett, J.K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.53 Å
• R-Value Free: 
  0.292 (Depositor), 0.314 (DCC) 
• R-Value Work: 
  0.240 (Depositor), 0.254 (DCC) 
• R-Value Observed: 
  0.243 (Depositor) 

Literature

Crystal Structure of the Tll1086 protein from Thermosynechococcus elongatus.

Vorobiev, S., Su, M., Seetharaman, J., Maglaqui, M., Xiao, X., Kohan, E., Wang, D., Everett, J.K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 14.91 kDa 
• Atom Count: 919 
• Modelled Residue Count: 120 
• Deposited Residue Count: 134 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Tll1086 protein	A	134	Thermosynechococcus vestitus BP-1	Mutation(s): 0  Gene Names: tll1086
UniProt
Find proteins for Q8DJY4 (Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)) Explore Q8DJY4  Go to UniProtKB:  Q8DJY4

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.53 Å
• R-Value Free:  0.292 (Depositor), 0.314 (DCC) 
• R-Value Work:  0.240 (Depositor), 0.254 (DCC) 
• R-Value Observed: 0.243 (Depositor) 

Space Group: P 6₁ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 87.768	α = 90
b = 87.768	β = 90
c = 76.08	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
PDB_EXTRACT	data extraction
ADSC	data collection
XDS	data reduction
XSCALE	data scaling
AutoSol	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-01-30 
Deposition Author(s): Vorobiev, S., Su, M., Seetharaman, J., Maglaqui, M., Xiao, X., Kohan, E., Wang, D., Everett, J.K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

Revision History  

• Version 1.0: 2013-01-30
  Type: Initial release
  
• Version 1.1: 2013-11-20
  Changes: Data collection
• Version 1.2: 2024-10-30
  Changes: Data collection, Database references, Derived calculations, Structure summary