7URW

Tetradecameric hub domain of CaMKII beta

PDB DOI: https://doi.org/10.2210/pdb7URW/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2022-04-22 Released: 2022-05-11
Deposition Author(s): Ozden, C., Samkutty, A., Stratton, M.M., Garman, S.C.
Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.11 Å
R-Value Free: 0.300
R-Value Work: 0.255
R-Value Observed: 0.257

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Tetradecameric hub domain of CaMKII beta

Ozden, C., Samkutty, A., Stratton, M.M., Garman, S.C.

To be published.

Macromolecule Content

Total Structure Weight: 109.12 kDa
Atom Count: 6,789
Modelled Residue Count: 879
Deposited Residue Count: 959
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Calcium/calmodulin-dependent protein kinase type II subunit beta	A [auth G] B [auth A] C [auth B] D [auth C] E [auth D] A [auth G], B [auth A], C [auth B], D [auth C], E [auth D], F [auth E], G [auth F]	137	Homo sapiens	Mutation(s): 0 Gene Names: CAMK2B, CAM2, CAMK2, CAMKB EC: 2.7.11.17
UniProt & NIH Common Fund Data Resources
Find proteins for Q13554 (Homo sapiens) Explore Q13554 Go to UniProtKB: Q13554
PHAROS: Q13554 GTEx: ENSG00000058404
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q13554
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.11 Å
R-Value Free: 0.300
R-Value Work: 0.255
R-Value Observed: 0.257
Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 104.236	α = 90
b = 183.189	β = 90
c = 108.37	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PDB_EXTRACT	data extraction
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2022-05-11

Deposition Author(s):

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	R01123157

Revision History (Full details and data files)

Version 1.0: 2022-05-11
Type: Initial release
Version 1.1: 2023-10-18
Changes: Data collection, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.