7X27

MERS-CoV spike complex

PDB DOI: https://doi.org/10.2210/pdb7X27/pdb
EM Map EMD-32960: EMDB EMDataResource

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Middle East respiratory syndrome-related coronavirus
Expression System: Trichoplusia ni
Mutation(s): Yes

Deposited: 2022-02-25 Released: 2023-03-22
Deposition Author(s): Zeng, J.W., Zhang, S.Y., Wang, X.W.
Funding Organization(s): Ministry of Science and Technology (MoST, China)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

cryo-EM structures of a human neutralizing antibody bound to MERS-CoV spike glycoprotein

Zhang, S.Y., Wang, X.W.

To be published.

Macromolecule Content

Total Structure Weight: 399.24 kDa
Atom Count: 22,770
Modelled Residue Count: 2,949
Deposited Residue Count: 3,636
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Spike glycoprotein	A [auth G], B [auth I], C [auth J]	1,212	Middle East respiratory syndrome-related coronavirus	Mutation(s): 3 Gene Names: S, 3
UniProt
Find proteins for K9N5Q8 (Middle East respiratory syndrome-related coronavirus (isolate United Kingdom/H123990006/2012)) Explore K9N5Q8 Go to UniProtKB: K9N5Q8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	K9N5Q8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-03-22

Deposition Author(s):

Funding Organization	Location	Grant Number
Ministry of Science and Technology (MoST, China)	China	2020YFC0845900

Revision History (Full details and data files)

Version 1.0: 2023-03-22
Type: Initial release
Version 1.1: 2024-11-13
Changes: Data collection, Structure summary

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.