B28 in complex with CRM1-Ran-RanBP1
Sun, Q., Lei, Y.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
GTP-binding nuclear protein Ran | 216 | Homo sapiens | Mutation(s): 2  Gene Names: RAN, ARA24, OK/SW-cl.81 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P62826 (Homo sapiens) Explore P62826  Go to UniProtKB:  P62826 | |||||
PHAROS:  P62826 GTEx:  ENSG00000132341  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P62826 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
YRB1 isoform 1 | 140 | Saccharomyces cerevisiae | Mutation(s): 0  Gene Names: YRB1, GI526_G0000915 | ||
UniProt | |||||
Find proteins for P41920 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P41920  Go to UniProtKB:  P41920 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P41920 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
CRM1 isoform 1 | 1,003 | Saccharomyces cerevisiae | Mutation(s): 11  Gene Names: CRM1, GI526_G0002640, PACBIOSEQ_LOCUS2878, PACBIOSEQ_LOCUS3002 | ||
UniProt | |||||
Find proteins for P30822 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P30822  Go to UniProtKB:  P30822 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P30822 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 7 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GTP Query on GTP | F [auth A] | GUANOSINE-5'-TRIPHOSPHATE C10 H16 N5 O14 P3 XKMLYUALXHKNFT-UUOKFMHZSA-N | |||
N5X (Subject of Investigation/LOI) Query on N5X | L [auth C] | 3-[(4-chlorophenyl)carbonylamino]-4-[4-(2,5-dimethylphenyl)piperazin-1-yl]benzoic acid C26 H26 Cl N3 O3 BQXRGKXBCYCKLD-UHFFFAOYSA-N | |||
GOL Query on GOL | E [auth A], J [auth C], K [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
BR Query on BR | G [auth A] | BROMIDE ION Br CPELXLSAUQHCOX-UHFFFAOYSA-M | |||
CL Query on CL | H [auth C] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
MG Query on MG | D [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | |||
NA Query on NA | I [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 106.361 | α = 90 |
b = 106.361 | β = 90 |
c = 304.641 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
HKL-3000 | data reduction |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |