4OXV | pdb_00004oxv

Crystal structure of MltF from Pseudomonas aeruginosa complexed with valine

• PDB DOI: https://doi.org/10.2210/pdb4OXV/pdb

• Classification: LYASE
• Organism(s): Pseudomonas aeruginosa PADK2_CF510
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2014-02-07 Released: 2015-03-18 
• Deposition Author(s): Reddem, E., Thunnissen, A.M.W.H.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.20 Å
• R-Value Free: 
  0.244 (Depositor), 0.250 (DCC) 
• R-Value Work: 
  0.176 (Depositor), 0.180 (DCC) 
• R-Value Observed: 
  0.179 (Depositor) 

Literature

Crystal structure of MltF from Pseudomonas aeruginosa complexed with valine

Reddem, E., Thunnissen, A.M.W.H.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 49.4 kDa 
• Atom Count: 3,631 
• Modelled Residue Count: 424 
• Deposited Residue Count: 435 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Membrane-bound lytic murein transglycosylase F	A	435	Pseudomonas aeruginosa PADK2_CF510	Mutation(s): 0  Gene Names: CF510_16633, MltF EC: 4.2.2
UniProt
Find proteins for A0A0J9X1Z1 (Pseudomonas aeruginosa PADK2_CF510) Explore A0A0J9X1Z1  Go to UniProtKB:  A0A0J9X1Z1

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
VAL	B [auth A]	VALINE C5 H11 N O2 KZSNJWFQEVHDMF-BYPYZUCNSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.20 Å
• R-Value Free:  0.244 (Depositor), 0.250 (DCC) 
• R-Value Work:  0.176 (Depositor), 0.180 (DCC) 
• R-Value Observed: 0.179 (Depositor) 

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 52.881	α = 90
b = 80.671	β = 90
c = 89.219	γ = 90

Software Package:

Software Name	Purpose
MOSFLM	data reduction
SCALA	data scaling
PHASER	phasing
REFMAC	refinement
PDB_EXTRACT	data extraction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2015-03-18 
Deposition Author(s): Reddem, E., Thunnissen, A.M.W.H.

Revision History  

• Version 1.0: 2015-03-18
  Type: Initial release
  
• Version 1.1: 2017-09-27
  Changes: Database references, Derived calculations, Other, Refinement description, Source and taxonomy, Structure summary
• Version 1.2: 2017-11-01
  Changes: Author supporting evidence
• Version 1.3: 2023-12-27
  Changes: Data collection, Database references, Refinement description