1KJ2
Murine Alloreactive ScFv TCR-Peptide-MHC Class I Molecule Complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth L] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054571 | 3000071 | SCOP2B (2022-06-29) |
H [auth M] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054571 | 3000071 | SCOP2B (2022-06-29) |
J [auth E] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054449 | 3000071 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2 Family | V set domains-like | 8054448 | 4007530 | SCOP2 (2022-06-29) |
E [auth B] | SCOP2 Superfamily | Immunoglobulin (Ig) domain-like | 8054449 | 3000071 | SCOP2 (2022-06-29) |
A [auth H] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054611 | 3000071 | SCOP2B (2022-06-29) |
A [auth H] | SCOP2B Superfamily | MHC antigen-recognition domain | 8036210 | 3000521 | SCOP2B (2022-06-29) |
F [auth I] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054611 | 3000071 | SCOP2B (2022-06-29) |
F [auth I] | SCOP2B Superfamily | MHC antigen-recognition domain | 8036210 | 3000521 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth L] | C1-set_2 | e1kj2L1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
H [auth M] | C1-set_2 | e1kj2M1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
D [auth A] | V-set_4 | e1kj2A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_4 | ECOD (1.6) |
I [auth D] | V-set_4 | e1kj2D1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_4 | ECOD (1.6) |
J [auth E] | V-set_3 | e1kj2E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
E [auth B] | V-set_3 | e1kj2B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
A [auth H] | C1-set_2 | e1kj2H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
A [auth H] | MHC_I | e1kj2H2 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_I | ECOD (1.6) |
F [auth I] | C1-set_2 | e1kj2I1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
F [auth I] | MHC_I | e1kj2I2 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_I | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
C [auth L], H [auth M] | MH1-K1b (H2-K1b) | B2M | Mus musculus (house mouse) | B2M*01 | C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202443-0) |
D [auth A], I [auth D] | TR KB5-C20 | V-ALPHA | Mus musculus (house mouse) | TRAV14-1*01, TRAV14N-1*01, TRAJ15*01 | V-DOMAIN V-ALPHA | TR | FV-ALPHA_BETA | IMGT (202443-0) |
E [auth B], J [auth E] | TR KB5-C20 | V-BETA | Mus musculus (house mouse) | TRBV1*01, TRBJ2-3*01 | V-DOMAIN V-BETA | TR | FV-ALPHA_BETA | IMGT (202443-0) |
A [auth H], F [auth I] | MH1-K1b (H2-K1b) | I-ALPHA | Mus musculus (house mouse) | MH1-K1b | G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2, C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202443-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth L], H [auth M] | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain |
E [auth B], J [auth E] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |
A [auth H], F [auth I] | PF00129 | Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I) | Class I Histocompatibility antigen, domains alpha 1 and 2 | - | Domain |
A [auth H], F [auth I] | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain |