1MFB

HIGH RESOLUTION STRUCTURES OF ANTIBODY FAB FRAGMENT COMPLEXED WITH CELL-SURFACE OLIGOSACCHARIDE OF PATHOGENIC SALMONELLA


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth L]SCOP2 FamilyAntibody variable domains 8091548 4007744 SCOP2 (2022-06-29)
A [auth L]SCOP2 FamilyAntibody constant domains 8091550 4007745 SCOP2 (2022-06-29)
A [auth L]SCOP2 SuperfamilyImmunoglobulin (Ig) domain-like 8091549 3000071 SCOP2 (2022-06-29)
A [auth L]SCOP2 SuperfamilyImmunoglobulin (Ig) domain-like 8091551 3000071 SCOP2 (2022-06-29)
B [auth H]SCOP2 FamilyAntibody variable domains 8091552 4007744 SCOP2 (2022-06-29)
B [auth H]SCOP2 FamilyAntibody constant domains 8091554 4007745 SCOP2 (2022-06-29)
B [auth H]SCOP2 SuperfamilyImmunoglobulin (Ig) domain-like 8091553 3000071 SCOP2 (2022-06-29)
B [auth H]SCOP2 SuperfamilyImmunoglobulin (Ig) domain-like 8091555 3000071 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth L]C1-sete1mfbL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
A [auth L]V-set_3e1mfbL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
B [auth H]V-set_8e1mfbH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
B [auth H]C1-set_1e1mfbH2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A [auth L]Se155-4 L-LAMBDA Mus musculus (house mouse) IGLV1*01, IGLJ1*01, IGLC1*01 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202445-0)
B [auth H]Se155-4 VH-CH1 Mus musculus (house mouse) IGHV1-5*01, IGHJ2*02, IGHJ2*03, IGHG1*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202445-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth L]Light ChainIGLV1 LambdapolysaccharideSAbDab (2024-11-15)
B [auth H]Heavy ChainIGHV1 -polysaccharideSAbDab (2024-11-15)