Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3cfoa1 Alpha and beta proteins (a/b) Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Exonuclease domain of family B DNA polymerases ( ) [TaxId: ], (Escherichia phage RB69 ) [TaxId: 12353 ], SCOPe (2.08)
Ad3cfoa2 Multi-domain proteins (alpha and beta) DNA/RNA polymerases DNA/RNA polymerases DNA polymerase I Family B DNA polymerase ( ) [TaxId: ], (Escherichia phage RB69 ) [TaxId: 12353 ], SCOPe (2.08)
Ad3cfoa3 Artifacts Tags Tags Tags C-terminal Tags ( ) [TaxId: ], (Escherichia phage RB69 ) [TaxId: 12353 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like 8033949 3001272 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyNucleotide cyclase/DNA polymerase palm domain-like 8033949 3001272 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRibonuclease H-like 8033947 3000143 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A43_2nde3cfoA5 A: alpha bundlesX: thumb domain in bacteriophage RB69-like DNA polymerase I (From Topology)H: thumb domain in bacteriophage RB69-like DNA polymerase I (From Topology)T: thumb domain in bacteriophage RB69-like DNA polymerase IF: 43_2ndECOD (1.6)
A43_1ste3cfoA6 A: alpha bundlesX: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)T: fingers domain in bacteriophage RB69-like DNA polymerase IF: 43_1stECOD (1.6)
ADNA_pol_B_1ste3cfoA7 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: DNA_pol_B_1stECOD (1.6)
ADNA_pol_B_exo1_3rde3cfoA4 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DNA_pol_B_exo1_3rdECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00136DNA polymerase family B (DNA_pol_B)DNA polymerase family B- Family
PF03104DNA polymerase family B, exonuclease domain (DNA_pol_B_exo1)DNA polymerase family B, exonuclease domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA polymerase -