Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3gk0a_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Pyridoxine 5'-phosphate synthase automated matches automated matches (Burkholderia pseudomallei 1710b ) [TaxId: 320372 ], SCOPe (2.08)
Bd3gk0b_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Pyridoxine 5'-phosphate synthase automated matches automated matches (Burkholderia pseudomallei 1710b ) [TaxId: 320372 ], SCOPe (2.08)
Cd3gk0c_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Pyridoxine 5'-phosphate synthase automated matches automated matches (Burkholderia pseudomallei 1710b ) [TaxId: 320372 ], SCOPe (2.08)
Dd3gk0d_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Pyridoxine 5'-phosphate synthase automated matches automated matches (Burkholderia pseudomallei 1710b ) [TaxId: 320372 ], SCOPe (2.08)
Ed3gk0e_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Pyridoxine 5'-phosphate synthase automated matches automated matches (Burkholderia pseudomallei 1710b ) [TaxId: 320372 ], SCOPe (2.08)
Fd3gk0f_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Pyridoxine 5'-phosphate synthase automated matches automated matches (Burkholderia pseudomallei 1710b ) [TaxId: 320372 ], SCOPe (2.08)
Gd3gk0g_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Pyridoxine 5'-phosphate synthase automated matches automated matches (Burkholderia pseudomallei 1710b ) [TaxId: 320372 ], SCOPe (2.08)
Hd3gk0h_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Pyridoxine 5'-phosphate synthase automated matches automated matches (Burkholderia pseudomallei 1710b ) [TaxId: 320372 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPyridoxine 5'-phosphate synthase 8074922 3000586 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPyridoxine 5'-phosphate synthase 8074922 3000586 SCOP2B (2022-06-29)
CSCOP2 FamilyPyridoxine 5'-phosphate synthase 8074921 4003313 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyPyridoxine 5'-phosphate synthase 8074922 3000586 SCOP2 (2022-06-29)
DSCOP2B SuperfamilyPyridoxine 5'-phosphate synthase 8074922 3000586 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyPyridoxine 5'-phosphate synthase 8074922 3000586 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyPyridoxine 5'-phosphate synthase 8074922 3000586 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyPyridoxine 5'-phosphate synthase 8074922 3000586 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyPyridoxine 5'-phosphate synthase 8074922 3000586 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APdxJe3gk0A1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PdxJECOD (1.6)
BPdxJe3gk0B1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PdxJECOD (1.6)
CPdxJe3gk0C1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PdxJECOD (1.6)
DPdxJe3gk0D1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PdxJECOD (1.6)
EPdxJe3gk0E1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PdxJECOD (1.6)
FPdxJe3gk0F1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PdxJECOD (1.6)
GPdxJe3gk0G1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PdxJECOD (1.6)
HPdxJe3gk0H1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PdxJECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
B3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
C3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
D3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
E3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
F3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
G3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
H3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF03740Pyridoxal phosphate biosynthesis protein PdxJ (PdxJ)Pyridoxal phosphate biosynthesis protein PdxJMembers of this family belong to the PdxJ family that catalyses the condensation of 1-deoxy-d-xylulose-5-phosphate (DXP) and 1-amino-3-oxo-4-(phosphohydroxy)propan-2-one to form pyridoxine 5'-phosphate (PNP). This reaction is involved in de novo synt ...Members of this family belong to the PdxJ family that catalyses the condensation of 1-deoxy-d-xylulose-5-phosphate (DXP) and 1-amino-3-oxo-4-(phosphohydroxy)propan-2-one to form pyridoxine 5'-phosphate (PNP). This reaction is involved in de novo synthesis of pyridoxine (vitamin B6) and pyridoxal phosphate [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR036130Pyridoxine 5'-phosphate synthaseHomologous Superfamily
A, B, C, D, E
IPR013785Aldolase-type TIM barrelHomologous Superfamily
A, B, C, D, E
IPR004569Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJFamily