3NDO
Crystal structure of deoxyribose phosphate aldolase from mycobacterium smegmatis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3ndob_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | automated matches | automated matches | (Mycolicibacterium smegmatis ) [TaxId: 1772 ], | SCOPe (2.08) |
A | d3ndoa_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | automated matches | automated matches | (Mycolicibacterium smegmatis ) [TaxId: 1772 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | DeoC_1 | e3ndoB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DeoC_1 | ECOD (1.6) |
A | DeoC_1 | e3ndoA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DeoC_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
A | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01791 | DeoC/LacD family aldolase (DeoC) | DeoC/LacD family aldolase | This family includes diverse aldolase enzymes. This family includes the enzyme deoxyribose-phosphate aldolase EC:4.1.2.4, which is involved in nucleotide metabolism. The family also includes a group of related bacterial proteins of unknown function, ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011343 | Deoxyribose-phosphate aldolase | Family | |
IPR002915 | DeoC/FbaB/LacD aldolase | Family | |
IPR028581 | Deoxyribose-phosphate aldolase type I | Family | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily |