Crystal structure of Marburg virus VP35 RNA binding domain bound to 12-bp dsRNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ebola VP35 IID-like | 8092333 | 3002590 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Ebola VP35 IID-like | 8092333 | 3002590 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | Ebola VP35 IID-like | 8092333 | 3002590 | SCOP2B (2022-06-29) |
D [auth G] | SCOP2B Superfamily | Ebola VP35 IID-like | 8092333 | 3002590 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Filo_VP35 | e4ghaA1 | A: a+b complex topology | X: Polymerase cofactor VP35 C-terminal RNA binding domain (From Topology) | H: Polymerase cofactor VP35 C-terminal RNA binding domain (From Topology) | T: Polymerase cofactor VP35 C-terminal RNA binding domain | F: Filo_VP35 | ECOD (1.6) |
B [auth C] | Filo_VP35 | e4ghaC2 | A: a+b complex topology | X: Polymerase cofactor VP35 C-terminal RNA binding domain (From Topology) | H: Polymerase cofactor VP35 C-terminal RNA binding domain (From Topology) | T: Polymerase cofactor VP35 C-terminal RNA binding domain | F: Filo_VP35 | ECOD (1.6) |
C [auth E] | Filo_VP35 | e4ghaE2 | A: a+b complex topology | X: Polymerase cofactor VP35 C-terminal RNA binding domain (From Topology) | H: Polymerase cofactor VP35 C-terminal RNA binding domain (From Topology) | T: Polymerase cofactor VP35 C-terminal RNA binding domain | F: Filo_VP35 | ECOD (1.6) |
D [auth G] | Filo_VP35 | e4ghaG2 | A: a+b complex topology | X: Polymerase cofactor VP35 C-terminal RNA binding domain (From Topology) | H: Polymerase cofactor VP35 C-terminal RNA binding domain (From Topology) | T: Polymerase cofactor VP35 C-terminal RNA binding domain | F: Filo_VP35 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth C], C [auth E], D [auth G] | Polymerase cofactor VP35 | - | - | |
E [auth I], F [auth J] | RNA (5'-R(*CP*UP*AP*GP*AP*CP*GP*UP*CP*UP*AP*G)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth E], D [auth G] | IPR031163 | Filoviruses VP35 interferon inhibitory domain | Domain |
A, B [auth C], C [auth E], D [auth G] | IPR043061 | Filoviruses VP35 interferon inhibitory domain, beta-sheet subdomain | Homologous Superfamily |
A, B [auth C], C [auth E], D [auth G] | IPR002953 | Filoviridae VP35 protein | Family |
A, B [auth C], C [auth E], D [auth G] | IPR043060 | Filoviruses VP35 interferon inhibitory domain, helical subdomain | Homologous Superfamily |