4GYW
Crystal structure of human O-GlcNAc Transferase in complex with UDP and a glycopeptide
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | TPR_11_1 | e4gywC20 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: TPR_11_1 | ECOD (1.6) |
C | Glyco_transf_41_2nd | e4gywC19 | A: a+b complex topology | X: Insertion domain in O-GlcNAc transferase (From Topology) | H: Insertion domain in O-GlcNAc transferase (From Topology) | T: Insertion domain in O-GlcNAc transferase | F: Glyco_transf_41_2nd | ECOD (1.6) |
C | Glyco_transf_41_1st | e4gywC18 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: Glyco_transf_41_1st | ECOD (1.6) |
C | Glyco_transf_41_3rd | e4gywC17 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: Glyco_transf_41_3rd | ECOD (1.6) |
A | TPR_11_1 | e4gywA7 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: TPR_11_1 | ECOD (1.6) |
A | Glyco_transf_41_2nd | e4gywA5 | A: a+b complex topology | X: Insertion domain in O-GlcNAc transferase (From Topology) | H: Insertion domain in O-GlcNAc transferase (From Topology) | T: Insertion domain in O-GlcNAc transferase | F: Glyco_transf_41_2nd | ECOD (1.6) |
A | Glyco_transf_41_1st | e4gywA8 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: Glyco_transf_41_1st | ECOD (1.6) |
A | Glyco_transf_41_3rd | e4gywA1 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: Glyco_transf_41_3rd | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
C | 3.40.50.11380 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
C | 3.30.720.150 | Alpha Beta | 2-Layer Sandwich | Signal recognition particle alu RNA binding heterodimer, srp9/1 | CATH (4.3.0) | |
C | 3.40.50.2000 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Glycogen Phosphorylase B | CATH (4.3.0) |
A | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
A | 3.40.50.11380 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
A | 3.30.720.150 | Alpha Beta | 2-Layer Sandwich | Signal recognition particle alu RNA binding heterodimer, srp9/1 | CATH (4.3.0) | |
A | 3.40.50.2000 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Glycogen Phosphorylase B | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13844 | Glycosyl transferase family 41 (Glyco_transf_41) | Glycosyl transferase family 41 | - | Family | |
PF13414 | TPR repeat (TPR_11) | TPR repeat | - | Repeat | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019734 | Tetratricopeptide repeat | Repeat | |
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR029489 | O-GlcNAc transferase, C-terminal | Domain | |
IPR045216 | Casein Kinase 2, subunit alpha | Family | |
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR000719 | Protein kinase domain | Domain | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site |