4LFH
Crystal Structure of 9C2 TCR
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | d4lfhd1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B [auth G] | d4lfhg2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B [auth G] | d4lfhg1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | C1-set_1 | e4lfhD3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
A [auth D] | V-set_4 | e4lfhD4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_4 | ECOD (1.6) |
B [auth G] | C1-set_1 | e4lfhG1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
B [auth G] | V-set_3 | e4lfhG2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth D] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B [auth G] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A [auth D] | 9C2 TR | TR-DELTA | Homo sapiens (human) | TRDV1*01, TRDJ1*01, TRDC*01 | V-DOMAIN V-DELTA, C-DOMAIN C-DELTA | TR | TR-GAMMA-1_DELTA | IMGT (202443-0) |
B [auth G] | 9C2 TR | TR-GAMMA-1 | Homo sapiens (human) | TRGV5*01, TRGJ1*01, TRGJ2*01, TRGC1*01, TRGC1*05, TRGC1*04 | V-DOMAIN V-GAMMA, C-DOMAIN C-GAMMA-1 | TR | TR-GAMMA-1_DELTA | IMGT (202443-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |
A [auth D] | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain |
B [auth G] | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth D] | IPR003597 | Immunoglobulin C1-set | Domain |
A [auth D] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A [auth D] | IPR051755 | Immunoglobulin-like Cell Surface Receptor | Family |
A [auth D] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
A [auth D] | IPR013106 | Immunoglobulin V-set domain | Domain |
A [auth D] | IPR003599 | Immunoglobulin domain subtype | Domain |
A [auth D] | IPR007110 | Immunoglobulin-like domain | Domain |
B [auth G] | IPR003597 | Immunoglobulin C1-set | Domain |
B [auth G] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
B [auth G] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
B [auth G] | IPR051117 | T cell receptor gamma variable/constant region | Family |
B [auth G] | IPR007110 | Immunoglobulin-like domain | Domain |