4NAQ
Crystal structure of porcine aminopeptidase-N complexed with poly-alanine
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4naqa4 | All alpha proteins | alpha-alpha superhelix | ARM repeat | automated matches | automated matches | pig (Sus scrofa ) [TaxId: 9823 ], | SCOPe (2.08) |
A | d4naqa3 | All beta proteins | Immunoglobulin-like beta-sandwich | Zn aminopeptidase insert domain | automated matches | automated matches | pig (Sus scrofa ) [TaxId: 9823 ], | SCOPe (2.08) |
A | d4naqa1 | All beta proteins | Zn aminopeptidase N-terminal domain | Zn aminopeptidase N-terminal domain | automated matches | automated matches | pig (Sus scrofa ) [TaxId: 9823 ], | SCOPe (2.08) |
A | d4naqa2 | Alpha and beta proteins (a+b) | Zincin-like | Metalloproteases ('zincins'), catalytic domain | automated matches | automated matches | pig (Sus scrofa ) [TaxId: 9823 ], | SCOPe (2.08) |
A | d4naqa5 | Artifacts | Tags | Tags | Tags | C-terminal Tags | pig (Sus scrofa ) [TaxId: 9823 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | ARM repeat-like | 8054072 | 3000116 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Leukotriene A4 hydrolase N-terminal domain | 8054070 | 3000390 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | ERAP1, insert domain | 8054069 | 3002272 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8054071 | 3001975 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ERAP1_C | e4naqA4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ERAP1_C | ECOD (1.6) |
A | Peptidase_M1_2 | e4naqA2 | A: beta sandwiches | X: Baculovirus p35 protein-related (From Topology) | H: Baculovirus p35 protein-related (From Topology) | T: Baculovirus p35 protein-related | F: Peptidase_M1_2 | ECOD (1.6) |
A | ERAP1_C | e4naqA3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: ERAP1_C | ECOD (1.6) |
A | Peptidase_M1_1 | e4naqA5 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: Peptidase_M1_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.1730 | Mainly Beta | Sandwich | Immunoglobulin-like | tricorn interacting facor f3 domain | CATH (4.3.0) |
A | 1.10.390.10 | Mainly Alpha | Orthogonal Bundle | Neutral Protease | domain 2 | CATH (4.3.0) |
A | 2.60.40.1910 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
A | 1.25.50.20 | Mainly Alpha | Alpha Horseshoe | Zincin-like fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11838 | ERAP1-like C-terminal domain (ERAP1_C) | ERAP1-like C-terminal domain | This large domain is composed of 16 alpha helices organized as 8 HEAT-like repeats. This domain forms a concave face that faces towards the active site of the peptidase. | Domain | |
PF01433 | Peptidase family M1 domain (Peptidase_M1) | Peptidase family M1 domain | Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase Swiss:P09960, this enzyme also has an aminopeptidase activ ... | Domain | |
PF17900 | Peptidase M1 N-terminal domain (Peptidase_M1_N) | Peptidase M1 N-terminal domain | This domain is found at the N-terminus of aminopeptidases from the M1 family. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001930 | Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase | Family | |
IPR027268 | Peptidase M4/M1, CTD superfamily | Homologous Superfamily | |
IPR034016 | Aminopeptidase N-type | Family | |
IPR014782 | Peptidase M1, membrane alanine aminopeptidase | Domain | |
IPR045357 | Aminopeptidase N-like , N-terminal domain | Domain | |
IPR042097 | Aminopeptidase N-like , N-terminal domain superfamliy | Homologous Superfamily | |
IPR024571 | ERAP1-like C-terminal domain | Domain | |
IPR050344 | Peptidase M1 family aminopeptidases | Family |