5A8B
Structure of a parallel dimer of the aureochrome 1a LOV domain from Phaeodactylum tricornutum
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5a8ba_ | Alpha and beta proteins (a+b) | Profilin-like | PYP-like sensor domain (PAS domain) | automated matches | automated matches | (Phaeodactylum tricornutum ) [TaxId: 2850 ], | SCOPe (2.08) |
B | d5a8bb_ | Alpha and beta proteins (a+b) | Profilin-like | PYP-like sensor domain (PAS domain) | automated matches | automated matches | (Phaeodactylum tricornutum ) [TaxId: 2850 ], | SCOPe (2.08) |
C | d5a8bc1 | Alpha and beta proteins (a+b) | Profilin-like | PYP-like sensor domain (PAS domain) | automated matches | automated matches | (Phaeodactylum tricornutum ) [TaxId: 2850 ], | SCOPe (2.08) |
C | d5a8bc2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Phaeodactylum tricornutum ) [TaxId: 2850 ], | SCOPe (2.08) |
D | d5a8bd_ | Alpha and beta proteins (a+b) | Profilin-like | PYP-like sensor domain (PAS domain) | automated matches | automated matches | (Phaeodactylum tricornutum ) [TaxId: 2850 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PAS | e5a8bA1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PAS | ECOD (1.6) |
B | PAS | e5a8bB1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PAS | ECOD (1.6) |
C | PAS | e5a8bC1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PAS | ECOD (1.6) |
D | PAS | e5a8bD1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PAS | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (4.3.0) |
B | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (4.3.0) |
C | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (4.3.0) |
D | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13426 | PAS domain (PAS_9) | PAS domain | This domain is found in many signalling proteins in which it functions as a sensor domain. It recognises FMN, Zn(II), FAD and riboflavin (MAtilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
PTAUREO1A LOV2 DOMAIN | - |