5DWU
Beta common receptor in complex with a Fab
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- IMGT Antibody Annotation
- SAbDab Antibody Annotation
- Thera-SAbDab Antibody Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Fibronectin type III | 8055137 | 3002063 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Fibronectin type III | 8055523 | 3002063 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Fibronectin type III | 8055525 | 3002063 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e5dwuA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF21460 | e5dwuA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF21460 | ECOD (1.6) |
B | PF00041 | e5dwuB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00041 | ECOD (1.6) |
B | PF09240 | e5dwuB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF09240 | ECOD (1.6) |
C [auth H] | PF07654 | e5dwuH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
C [auth H] | PF07686 | e5dwuH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
D [auth L] | PF07654 | e5dwuL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
D [auth L] | PF07686 | e5dwuL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
C [auth H] | Fab CSL311 | VH-CH1 | Homo sapiens (human) | IGHV3-23*01, IGHV3-23*02, IGHV3-23D*01, IGHJ3*02, IGHG4*01, IGHG4*04 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-4_KAPPA | IMGT (202422-0) |
D [auth L] | Fab CSL311 | L-KAPPA | Homo sapiens (human) | IGKV1-12*01, IGKV1D-12*01, IGKV1-12*02, IGKV1D-12*02, IGKJ5*01, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-4_KAPPA | IMGT (202422-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
C [auth H] | Heavy Chain | IGHV3 | - | cytokine receptor common subunit beta | cytokine receptor common subunit beta | SAbDab (2024-06-07) |
D [auth L] | Light Chain | IGKV1 | Kappa | cytokine receptor common subunit beta | cytokine receptor common subunit beta | SAbDab (2024-06-07) |
Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage
Chain | Name | Target | Provenance Source |
---|---|---|---|
C [auth H] | Trabikibart | CSF2RB/CD131 | Therapeutic SAbDab (2024-06-07) |
D [auth L] | Trabikibart | CSF2RB/CD131 | Therapeutic SAbDab (2024-06-07) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21460 | GM-CSF/IL-3/IL-5 receptor common beta subunit, N-terminal (IL3Rb_N) | GM-CSF/IL-3/IL-5 receptor common beta subunit, N-terminal | GM-CSF/IL-3/IL-5 receptor common beta subunit (IL3RB) is a cell surface receptor that plays a role in immune response and controls the production and differentiation of haematopoietic progenitor cells into lineage-restricted cells. It participates in ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003961 | Fibronectin type III | Domain | |
IPR011365 | Cytokine IL-3/IL-5/GM-CSF receptor common beta chain | Family | |
IPR003531 | Short hematopoietin receptor, family 1, conserved site | Conserved Site | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily | |
IPR048668 | Cytokine receptor common subunit beta, N-terminal | Domain | |
IPR003961 | Fibronectin type III | Domain | |
IPR011365 | Cytokine IL-3/IL-5/GM-CSF receptor common beta chain | Family | |
IPR003531 | Short hematopoietin receptor, family 1, conserved site | Conserved Site | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily | |
IPR048668 | Cytokine receptor common subunit beta, N-terminal | Domain |