Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyNuclear receptor ligand-binding domain 8038695 3001442 SCOP2B (2022-06-29)
B [auth D]SCOP2B SuperfamilyNuclear receptor ligand-binding domain 8035649 3001442 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHormone_recepe5ji0A1 A: alpha arraysX: Nuclear receptor ligand-binding domain (From Topology)H: Nuclear receptor ligand-binding domain (From Topology)T: Nuclear receptor ligand-binding domainF: Hormone_recepECOD (1.6)
B [auth D]Hormone_recep_1e5ji0D1 A: alpha arraysX: Nuclear receptor ligand-binding domain (From Topology)H: Nuclear receptor ligand-binding domain (From Topology)T: Nuclear receptor ligand-binding domainF: Hormone_recep_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.565.10 Mainly Alpha Orthogonal Bundle Retinoid X Receptor Retinoid X ReceptorCATH (4.3.0)
B [auth D]1.10.565.10 Mainly Alpha Orthogonal Bundle Retinoid X Receptor Retinoid X ReceptorCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth D]PF00104Ligand-binding domain of nuclear hormone receptor (Hormone_recep)Ligand-binding domain of nuclear hormone receptorThis all helical domain is involved in binding the hormone in these receptors.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth E],
D [auth F]
Nuclear receptor coactivator 1
Retinoic acid receptor RXR-alpha
B [auth D]Peroxisome proliferator-activated receptor gamma

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth E],
D [auth F]
IPR010011Nuclear receptor coactivator, DUF1518Domain
C [auth E],
D [auth F]
IPR028819Nuclear receptor coactivator 1, basic helix-loop-helixDomain
C [auth E],
D [auth F]
IPR009110Nuclear receptor coactivator, interlockingHomologous Superfamily
C [auth E],
D [auth F]
IPR017426Nuclear receptor coactivatorFamily
C [auth E],
D [auth F]
IPR014935Nuclear receptor coactivator, receptor-binding domainDomain
C [auth E],
D [auth F]
IPR014920Nuclear receptor coactivator, Ncoa-type, interlockingDomain
C [auth E],
D [auth F]
IPR035965PAS domain superfamilyHomologous Superfamily
C [auth E],
D [auth F]
IPR036638Helix-loop-helix DNA-binding domain superfamilyHomologous Superfamily
C [auth E],
D [auth F]
IPR037077Nuclear receptor coactivator, Ncoa-type, interlocking domain superfamilyHomologous Superfamily
C [auth E],
D [auth F]
IPR013767PAS foldDomain
C [auth E],
D [auth F]
IPR000014PAS domainDomain
C [auth E],
D [auth F]
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainDomain
IPR001628Zinc finger, nuclear hormone receptor-typeDomain
IPR021780Nuclear/hormone receptor activator site AF-1Domain
IPR013088Zinc finger, NHR/GATA-typeHomologous Superfamily
IPR000003Retinoid X receptor/HNF4Family
IPR050274Nuclear hormone receptor family NR2 subfamilyFamily
IPR001723Nuclear hormone receptorFamily
IPR000536Nuclear hormone receptor, ligand-binding domainDomain
IPR035500Nuclear hormone receptor-like domain superfamilyHomologous Superfamily
B [auth D]IPR001628Zinc finger, nuclear hormone receptor-typeDomain
B [auth D]IPR013088Zinc finger, NHR/GATA-typeHomologous Superfamily
B [auth D]IPR001723Nuclear hormone receptorFamily
B [auth D]IPR003077Peroxisome proliferator-activated receptor gammaFamily
B [auth D]IPR000536Nuclear hormone receptor, ligand-binding domainDomain
B [auth D]IPR003074Peroxisome proliferator-activated receptorFamily
B [auth D]IPR050234Nuclear hormone receptor family NR1 subfamilyFamily
B [auth D]IPR022590Peroxisome proliferator-activated receptor gamma, N-terminalDomain
B [auth D]IPR035500Nuclear hormone receptor-like domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth E],
D [auth F]
PharosQ15788
PharosP19793
B [auth D]PharosP37231

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
C [auth E],
D [auth F]
ACE RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354

PSI-MOD :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359
C [auth E],
D [auth F]
NH2 RESIDAA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 , AA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100

PSI-MOD :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 , L-alanine amide MOD:00090 , L-asparagine amide MOD:00092 , L-aspartic acid 1-amide MOD:00093 , L-glutamine amide MOD:00095 , L-glutamic acid 1-amide MOD:00096 , glycine amide MOD:00097 , L-isoleucine amide MOD:00099 , L-leucine amide MOD:00100 , L-lysine amide MOD:00101 , L-methionine amide MOD:00102 , L-proline amide MOD:00104 , L-serine amide MOD:00105 , L-threonine amide MOD:00106 , L-tryptophan amide MOD:00107 , L-tyrosine amide MOD:00108 , L-valine amide MOD:00109