6JUY
Crystal Structure of ArgZ, apo structure, an Arginine Dihydrolase from the Ornithine-Ammonia Cycle in Cyanobacteria
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF21571 | e6juyA2 | A: beta barrels | X: MMP1218-like (From Topology) | H: MMP1218-like (From Topology) | T: MMP1218-like | F: PF21571 | ECOD (1.6) |
A | PF04455 | e6juyA4 | A: a+b two layers | X: Alpha-beta plaits | H: MJ1480-like (From Topology) | T: MJ1480-like | F: PF04455 | ECOD (1.6) |
A | PF19420 | e6juyA3 | A: a+b duplicates or obligate multimers | X: Pentein (From Topology) | H: Pentein (From Topology) | T: Pentein | F: PF19420 | ECOD (1.6) |
A | PF21570 | e6juyA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: PF21570 | ECOD (1.6) |
B | PF21571 | e6juyB2 | A: beta barrels | X: MMP1218-like (From Topology) | H: MMP1218-like (From Topology) | T: MMP1218-like | F: PF21571 | ECOD (1.6) |
B | PF04455 | e6juyB3 | A: a+b two layers | X: Alpha-beta plaits | H: MJ1480-like (From Topology) | T: MJ1480-like | F: PF04455 | ECOD (1.6) |
B | PF19420 | e6juyB4 | A: a+b duplicates or obligate multimers | X: Pentein (From Topology) | H: Pentein (From Topology) | T: Pentein | F: PF19420 | ECOD (1.6) |
B | PF21570 | e6juyB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: PF21570 | ECOD (1.6) |
C | PF21571 | e6juyC2 | A: beta barrels | X: MMP1218-like (From Topology) | H: MMP1218-like (From Topology) | T: MMP1218-like | F: PF21571 | ECOD (1.6) |
C | PF04455 | e6juyC4 | A: a+b two layers | X: Alpha-beta plaits | H: MJ1480-like (From Topology) | T: MJ1480-like | F: PF04455 | ECOD (1.6) |
C | PF19420 | e6juyC3 | A: a+b duplicates or obligate multimers | X: Pentein (From Topology) | H: Pentein (From Topology) | T: Pentein | F: PF19420 | ECOD (1.6) |
C | PF21570 | e6juyC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: PF21570 | ECOD (1.6) |
D | PF21571 | e6juyD2 | A: beta barrels | X: MMP1218-like (From Topology) | H: MMP1218-like (From Topology) | T: MMP1218-like | F: PF21571 | ECOD (1.6) |
D | PF04455 | e6juyD4 | A: a+b two layers | X: Alpha-beta plaits | H: MJ1480-like (From Topology) | T: MJ1480-like | F: PF04455 | ECOD (1.6) |
D | PF19420 | e6juyD3 | A: a+b duplicates or obligate multimers | X: Pentein (From Topology) | H: Pentein (From Topology) | T: Pentein | F: PF19420 | ECOD (1.6) |
D | PF21570 | e6juyD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: DHS-like NAD/FAD-binding domain | F: PF21570 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21570 | Arginine dihydrolase ArgZ-like, C-terminal, Rossmann fold (ArgZ-like_C_2nd) | Arginine dihydrolase ArgZ-like, C-terminal, Rossmann fold | This domain is found at the C-terminal end of Arginine dihydrolase ArgZ from Synechocystis sp (also known as Sll1336 protein) and similar prokaryotic sequences. ArgZ is involved in an ornithine- ammonia cycle (OAC) in cyanobacteria, which confers sub ... | Domain | |
PF19420 | N,N dimethylarginine dimethylhydrolase, eukaryotic (DDAH_eukar) | N,N dimethylarginine dimethylhydrolase, eukaryotic | - | Family | |
PF21571 | Arginine dihydrolase ArgZ-like, C-terminal, first region (ArgZ-like_C_1st) | Arginine dihydrolase ArgZ-like, C-terminal, first region | This domain is found at the C-terminal end of Arginine dihydrolase ArgZ from Synechocystis sp (also known as Sll1336 protein) and similar prokaryotic sequences. ArgZ is involved in an ornithine- ammonia cycle (OAC) in cyanobacteria, which confers sub ... | Domain | |
PF04455 | LOR/SDH bifunctional enzyme conserved region (Saccharop_dh_N) | LOR/SDH bifunctional enzyme conserved region | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR048963 | Arginine dihydrolase ArgZ-like, C-terminal, second subdomain | Domain | |
IPR005239 | Conserved hypothetical protein CHP00300 | Family | |
IPR048964 | Arginine dihydrolase ArgZ-like, C-terminal, first subdomain | Domain | |
IPR007545 | LOR/SDH bifunctional enzyme, conserved domain | Domain | |
IPR029035 | DHS-like NAD/FAD-binding domain superfamily | Homologous Superfamily |