6OST

RF2 pre-accommodated state bound Release complex 70S at 24ms


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
JSCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
KSCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
RSCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
USCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
AA [auth b]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
BA [auth c]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
DA [auth e]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
EA [auth f]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
FA [auth g]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
HA [auth i]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
JA [auth k]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
KA [auth l]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
LA [auth m]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
MA [auth n]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
NA [auth o]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
OA [auth p]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
PA [auth q]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
QA [auth r]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
RA [auth s]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
SA [auth t]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
TA [auth u]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
UA [auth v]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
WA [auth x]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
YA [auth z]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
AB [auth 7]SCOP2B SuperfamilyRelease factor N-terminal domain-like 8038812 3001827 SCOP2B (2022-06-29)
AB [auth 7]SCOP2B SuperfamilyPeptidyl-tRNA hydrolase domain-like 8054401 3001421 SCOP2B (2022-06-29)
AB [auth 7]SCOP2B SuperfamilyRNA-binding domain, RBD 8054399 3000110 SCOP2B (2022-06-29)
F [auth D]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
H [auth F]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
H [auth F]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
I [auth G]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
I [auth G]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
JRibosomal_L13e6ostJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
KRibosomal_L14e6ostK1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
LRibosomal_L27Ae6ostL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
MRibosomal_L16e6ostM1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
NRibosomal_L17_1e6ostN1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
ORibosomal_L18pe6ostO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
PRibosomal_L19e6ostP1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
QRibosomal_L20e6ostQ1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
RRibosomal_L21pe6ostR1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
SRibosomal_L22e6ostS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
TRibosomal_L23_2e6ostT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
Uribosomal_L24_1e6ostU1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
VRibosomal_L25pe6ostV1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
WRibosomal_L27e6ostW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
XRibosomal_L28e6ostX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
YRibosomal_L29e6ostY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
ZRibosomal_L30e6ostZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
AA [auth b]Ribosomal_L32pe6ostb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
BA [auth c]Ribosomal_L33e6ostc1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
CA [auth d]Ribosomal_L34e6ostd1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
DA [auth e]Ribosomal_L35pe6oste1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
EA [auth f]Ribosomal_L36e6ostf1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
FA [auth g]Ribosomal_S2e6ostg1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
GA [auth h]Ribosomal_S3_Ce6osth2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
GA [auth h]KH_2_1e6osth1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
HA [auth i]S4e6osti1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
IA [auth j]Ribosomal_S5_Ce6ostj2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
IA [auth j]Ribosomal_S5e6ostj1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
JA [auth k]Ribosomal_S6e6ostk1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
KA [auth l]Ribosomal_S7_1e6ostl1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
LA [auth m]Ribosomal_S8_Ne6ostm2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
LA [auth m]Ribosomal_S8_Ce6ostm1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
MA [auth n]Ribosomal_S9e6ostn1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
D [auth B]Ribosomal_L2_1e6ostB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
D [auth B]Ribosomal_L2_Ce6ostB2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
NA [auth o]Ribosomal_S10e6osto1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
OA [auth p]Ribosomal_S11e6ostp1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
PA [auth q]Ribosom_S12_S23e6ostq1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
QA [auth r]Ribosomal_S13_1e6ostr1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
RA [auth s]Ribosomal_S14_1e6osts1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
SA [auth t]Ribosomal_S15_1e6ostt1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
TA [auth u]Ribosomal_S16e6ostu1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
UA [auth v]Ribosomal_S17_1e6ostv1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
VA [auth w]Ribosomal_S18e6ostw1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
WA [auth x]Ribosomal_S19e6ostx1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
E [auth C]Ribosomal_L3e6ostC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
XA [auth y]Ribosomal_S20pe6osty1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
YA [auth z]Ribosomal_S21e6ostz1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21ECOD (1.6)
AB [auth 7]PCRF_N_1e6ost72 A: alpha bundlesX: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology)H: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology)T: Release factor (Pfam 00472) N-terminal alpha helical domainF: PCRF_N_1ECOD (1.6)
AB [auth 7]PCRF_Ce6ost71 A: a+b two layersX: Alpha-beta plaitsH: Ferredoxin-like domain in release factor (From Topology)T: Ferredoxin-like domain in release factorF: PCRF_CECOD (1.6)
AB [auth 7]RF-1_Ne6ost74 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_NECOD (1.6)
AB [auth 7]RF-1_Ce6ost73 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_CECOD (1.6)
F [auth D]Ribosomal_L4e6ostD1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
G [auth E]Ribosomal_L5_Ce6ostE1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
H [auth F]Ribosomal_L6e6ostF2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
H [auth F]Ribosomal_L6_1e6ostF1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
I [auth G]Ribosomal_L9_Ne6ostG1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
I [auth G]Ribosomal_L9_C_1e6ostG2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_C_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
PF00467KOW motif (KOW)KOW motif- Family
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
D [auth B]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
D [auth B]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
D [auth B]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
E [auth C]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
E [auth C]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
AB [auth 7]PF03462PCRF domain (PCRF)PCRF domainThis domain is found in peptide chain release factors.Domain
AB [auth 7]PF00472RF-1 domain (RF-1)RF-1 domain- Family
F [auth D]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
F [auth D]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
G [auth E]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
G [auth E]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
G [auth E]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
H [auth F]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
I [auth G]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
I [auth G]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
I [auth G]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]23S Ribosomal RNA---
50S ribosomal protein L13
50S ribosomal protein L14
50S ribosomal protein L15
50S ribosomal protein L16
50S ribosomal protein L17
50S ribosomal protein L18
50S ribosomal protein L19
50S ribosomal protein L20
50S ribosomal protein L21
50S ribosomal protein L22
B [auth 2]16S Ribosomal RNA---
50S ribosomal protein L23
50S ribosomal protein L24
50S ribosomal protein L25
50S ribosomal protein L27
50S ribosomal protein L28
50S ribosomal protein L29
50S ribosomal protein L30
AA [auth b]50S ribosomal protein L32
BA [auth c]50S ribosomal protein L33
CA [auth d]50S ribosomal protein L34
C [auth 3]5S Ribosomal RNA---
DA [auth e]50S ribosomal protein L35
EA [auth f]50S ribosomal protein L36
FA [auth g]30S ribosomal protein S2
GA [auth h]30S ribosomal protein S3
HA [auth i]30S ribosomal protein S4
IA [auth j]30S ribosomal protein S5
JA [auth k]30S ribosomal protein S6
KA [auth l]30S ribosomal protein S7
LA [auth m]30S ribosomal protein S8
MA [auth n]30S ribosomal protein S9
D [auth B]50S ribosomal protein L2
NA [auth o]30S ribosomal protein S10
OA [auth p]30S ribosomal protein S11
PA [auth q]30S ribosomal protein S12
QA [auth r]30S ribosomal protein S13
RA [auth s]30S ribosomal protein S14
SA [auth t]30S ribosomal protein S15
TA [auth u]30S ribosomal protein S16
UA [auth v]30S ribosomal protein S17
VA [auth w]30S ribosomal protein S18
WA [auth x]30S ribosomal protein S19
E [auth C]50S ribosomal protein L3
XA [auth y]30S ribosomal protein S20
YA [auth z]30S ribosomal protein S21
ZA [auth 4]mRNA---
AB [auth 7]Peptide chain release factor 2
BB [auth 5]P-tRNA---
CB [auth 6]FME-PHE-PHE---
F [auth D]50S ribosomal protein L4
G [auth E]50S ribosomal protein L5
H [auth F]50S ribosomal protein L6
I [auth G]50S ribosomal protein L9

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IPR005822Large ribosomal subunit protein uL13Family
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
IPR000218Large ribosomal subunit protein uL14Family
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
IPR021131Large ribosomal subunit protein uL15/eL18Domain
IPR030878Large ribosomal subunit protein uL15Family
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
IPR016180Large ribosomal subunit protein uL16 domainDomain
IPR047873Large ribosomal subunit protein uL16Family
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
IPR000456Large ribosomal subunit protein bL17Family
IPR005484Large ribosomal subunit protein uL18Family
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
IPR001857Large ribosomal subunit protein bL19Family
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
IPR005813Large ribosomal subunit protein bL20Family
IPR028909Large ribosomal subunit protein bL21-likeFamily
IPR001787Large ribosomal subunit protein bL21Family
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
IPR001063Large ribosomal subunit protein uL22Family
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
IPR013025Large ribosomal subunit protein uL23-likeFamily
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR003256Large ribosomal subunit protein uL24Family
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
IPR005824KOWDomain
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
IPR020055Ribosomal protein bL25, short-formFamily
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
IPR050070Bacterial ribosomal protein bL25Family
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
IPR001684Large ribosomal subunit protein bL27Family
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
IPR026569Large ribosomal subunit protein bL28Family
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
IPR050063Universal ribosomal protein uL29Family
IPR001854Large ribosomal subunit protein uL29Family
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
AA [auth b]IPR002677Large ribosomal subunit protein bL32Family
AA [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth b]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
BA [auth c]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth c]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth c]IPR001705Large ribosomal subunit protein bL33Family
BA [auth c]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CA [auth d]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth d]IPR000271Large ribosomal subunit protein bL34Family
DA [auth e]IPR021137Large ribosomal subunit protein bL35-likeFamily
DA [auth e]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DA [auth e]IPR001706Large ribosomal subunit protein bL35Family
DA [auth e]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
EA [auth f]IPR000473Large ribosomal subunit protein bL36Family
EA [auth f]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
FA [auth g]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
FA [auth g]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
FA [auth g]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
FA [auth g]IPR001865Small ribosomal subunit protein uS2Family
GA [auth h]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
GA [auth h]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
GA [auth h]IPR004087K Homology domainDomain
GA [auth h]IPR004044K Homology domain, type 2Domain
GA [auth h]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
GA [auth h]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
GA [auth h]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
GA [auth h]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
HA [auth i]IPR002942RNA-binding S4 domainDomain
HA [auth i]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
HA [auth i]IPR022801Small ribosomal subunit protein uS4Family
HA [auth i]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
HA [auth i]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
HA [auth i]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IA [auth j]IPR000851Small ribosomal subunit protein uS5Family
IA [auth j]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
IA [auth j]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
IA [auth j]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IA [auth j]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
IA [auth j]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
IA [auth j]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
JA [auth k]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
JA [auth k]IPR000529Small ribosomal subunit protein bS6Family
JA [auth k]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
JA [auth k]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
JA [auth k]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
KA [auth l]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
KA [auth l]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
KA [auth l]IPR000235Small ribosomal subunit protein uS7Family
KA [auth l]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
KA [auth l]IPR023798Small ribosomal subunit protein uS7 domainDomain
LA [auth m]IPR000630Small ribosomal subunit protein uS8Family
LA [auth m]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
LA [auth m]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
MA [auth n]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
MA [auth n]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
MA [auth n]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
MA [auth n]IPR000754Small ribosomal subunit protein uS9Family
MA [auth n]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
D [auth B]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth B]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth B]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth B]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth B]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
D [auth B]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth B]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth B]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth B]IPR002171Large ribosomal subunit protein uL2Family
NA [auth o]IPR027486Small ribosomal subunit protein uS10 domainDomain
NA [auth o]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
NA [auth o]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
NA [auth o]IPR001848Small ribosomal subunit protein uS10Family
OA [auth p]IPR001971Small ribosomal subunit protein uS11Family
OA [auth p]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
OA [auth p]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
OA [auth p]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
PA [auth q]IPR005679Ribosomal protein uS12, bacterial-typeFamily
PA [auth q]IPR006032Small ribosomal subunit protein uS12Family
PA [auth q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QA [auth r]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
QA [auth r]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
QA [auth r]IPR001892Small ribosomal subunit protein uS13Family
QA [auth r]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
QA [auth r]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
RA [auth s]IPR001209Small ribosomal subunit protein uS14Family
RA [auth s]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
RA [auth s]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
SA [auth t]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
SA [auth t]IPR000589Small ribosomal subunit protein uS15Family
SA [auth t]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
TA [auth u]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
TA [auth u]IPR000307Small ribosomal subunit protein bS16Family
TA [auth u]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
UA [auth v]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
UA [auth v]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
UA [auth v]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UA [auth v]IPR000266Small ribosomal subunit protein uS17Family
VA [auth w]IPR001648Small ribosomal subunit protein bS18Family
VA [auth w]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
VA [auth w]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
WA [auth x]IPR002222Small ribosomal subunit protein uS19Family
WA [auth x]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
WA [auth x]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
WA [auth x]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
E [auth C]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth C]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
E [auth C]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
E [auth C]IPR000597Large ribosomal subunit protein uL3Family
XA [auth y]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
XA [auth y]IPR002583Small ribosomal subunit protein bS20Family
YA [auth z]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
YA [auth z]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
YA [auth z]IPR001911Small ribosomal subunit protein bS21Family
AB [auth 7]IPR004374Peptide chain release factor 2Family
AB [auth 7]IPR000352Peptide chain release factor class IDomain
AB [auth 7]IPR045853Peptide chain release factor class I superfamilyHomologous Superfamily
AB [auth 7]IPR005139Peptide chain release factorDomain
F [auth D]IPR013005Large ribosomal subunit protein uL4-likeFamily
F [auth D]IPR002136Large ribosomal subunit protein uL4Family
F [auth D]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth E]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
G [auth E]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
G [auth E]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
G [auth E]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
G [auth E]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
G [auth E]IPR002132Large ribosomal subunit protein uL5Family
H [auth F]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
H [auth F]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
H [auth F]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
H [auth F]IPR000702Large ribosomal subunit protein uL6-likeFamily
H [auth F]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
I [auth G]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
I [auth G]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
I [auth G]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
I [auth G]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
I [auth G]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
I [auth G]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
I [auth G]IPR000244Large ribosomal subunit protein bL9Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth 1]1MG Parent Component: G

A [auth 1]2MA Parent Component: A

A [auth 1]2MG Parent Component: G

A [auth 1]3TD Parent Component: U

A [auth 1]5MC Parent Component: C

A [auth 1]5MU Parent Component: U

A [auth 1]6MZ Parent Component: A

A [auth 1]G7M Parent Component: G

A [auth 1]OMC Parent Component: C

A [auth 1]OMG Parent Component: G

A [auth 1]OMU Parent Component: U

A [auth 1]PSU Parent Component: U

B [auth 2]2MG Parent Component: G

B [auth 2]4OC Parent Component: C

B [auth 2]5MC Parent Component: C

B [auth 2]G7M Parent Component: G

B [auth 2]MA6 Parent Component: A

B [auth 2]PSU Parent Component: U

B [auth 2]UR3 Parent Component: U

PA [auth q]0TD Parent Component: ASP

BB [auth 5]4OC Parent Component: C

BB [auth 5]4SU Parent Component: U

BB [auth 5]5MU Parent Component: U

BB [auth 5]H2U Parent Component: U

BB [auth 5]PSU Parent Component: U

CB [auth 6]FME Parent Component: MET

RESIDAA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891