6TAR

Structure of the five-fold capsomer of the dArc1 capsid

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	EUF08046	e6tarA1	A: alpha bundles	X: Retrovirus capsid protein	H: Retrovirus capsid protein-C (From Topology)	T: Retrovirus capsid protein-C	F: EUF08046	ECOD (1.6)
A	Retrotrans_gag_like	e6tarA2	A: alpha bundles	X: Retrovirus capsid protein	H: Retrovirus capsid protein N-terminal domain (From Topology)	T: Retrovirus capsid protein N-terminal domain	F: Retrotrans_gag_like	ECOD (1.6)
B	EUF08046	e6tarB1	A: alpha bundles	X: Retrovirus capsid protein	H: Retrovirus capsid protein-C (From Topology)	T: Retrovirus capsid protein-C	F: EUF08046	ECOD (1.6)
B	Retrotrans_gag_like	e6tarB2	A: alpha bundles	X: Retrovirus capsid protein	H: Retrovirus capsid protein N-terminal domain (From Topology)	T: Retrovirus capsid protein N-terminal domain	F: Retrotrans_gag_like	ECOD (1.6)
C	EUF08046	e6tarC1	A: alpha bundles	X: Retrovirus capsid protein	H: Retrovirus capsid protein-C (From Topology)	T: Retrovirus capsid protein-C	F: EUF08046	ECOD (1.6)
C	Retrotrans_gag_like	e6tarC2	A: alpha bundles	X: Retrovirus capsid protein	H: Retrovirus capsid protein N-terminal domain (From Topology)	T: Retrovirus capsid protein N-terminal domain	F: Retrotrans_gag_like	ECOD (1.6)
D	EUF08046	e6tarD1	A: alpha bundles	X: Retrovirus capsid protein	H: Retrovirus capsid protein-C (From Topology)	T: Retrovirus capsid protein-C	F: EUF08046	ECOD (1.6)
D	Retrotrans_gag_like	e6tarD2	A: alpha bundles	X: Retrovirus capsid protein	H: Retrovirus capsid protein N-terminal domain (From Topology)	T: Retrovirus capsid protein N-terminal domain	F: Retrotrans_gag_like	ECOD (1.6)
E	EUF08046	e6tarE1	A: alpha bundles	X: Retrovirus capsid protein	H: Retrovirus capsid protein-C (From Topology)	T: Retrovirus capsid protein-C	F: EUF08046	ECOD (1.6)
E	Retrotrans_gag_like	e6tarE2	A: alpha bundles	X: Retrovirus capsid protein	H: Retrovirus capsid protein N-terminal domain (From Topology)	T: Retrovirus capsid protein N-terminal domain	F: Retrotrans_gag_like	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	Activity-regulated cytoskeleton associated protein 1	RNA binding binding organic cyclic compound binding nucleic acid binding mRNA binding structural molecule activity identical protein binding protein binding	localization intercellular transport transport cellular process establishment of localization vesicle-mediated intercellular transport vesicle-mediated transport regulation of neuronal synaptic plasticity regulation of synaptic plasticity trans-synaptic signaling regulation of biological process regulation of signaling regulation of cellular process modulation of chemical synaptic transmission localization intercellular transport transport cellular process establishment of localization vesicle-mediated intercellular transport vesicle-mediated transport regulation of neuronal synaptic plasticity regulation of synaptic plasticity trans-synaptic signaling regulation of biological process regulation of signaling regulation of cellular process modulation of chemical synaptic transmission signaling biological regulation cell-cell signaling chemical synaptic transmission cell communication synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of cell communication regulation of biological quality RNA transport nitrogen compound transport nucleic acid transport mRNA transport establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport response to nutrient levels behavioral response to starvation response to stimulus response to stress response to starvation multicellular organismal process system process muscle system process	postsynapse neuromuscular junction synapse cell junction cellular anatomical entity postsynapse of neuromuscular junction membrane intracellular anatomical structure sarcomere intracellular organelle organelle intracellular non-membrane-bounded organelle contractile muscle fiber cytoplasm postsynapse neuromuscular junction synapse cell junction cellular anatomical entity postsynapse of neuromuscular junction membrane intracellular anatomical structure sarcomere intracellular organelle organelle intracellular non-membrane-bounded organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer supramolecular complex non-membrane-bounded organelle virus-like capsid membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region vesicle extracellular membrane-bounded organelle

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.