Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyWD40 repeat-like 8051194 3001694 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyWD40 repeat-like 8051194 3001694 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyWD40 repeat-like 8051194 3001694 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyProtein kinase-like (PK-like) 8062460 3000066 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyProtein kinase-like (PK-like) 8062460 3000066 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyProtein kinase-like (PK-like) 8062460 3000066 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCyclin-like 8034370 3000768 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCyclin-like 8034372 3000768 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCyclin-like 8034372 3000768 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCyclin-like 8034370 3000768 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyCyclin-like 8034370 3000768 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyCyclin-like 8034372 3000768 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACPSF_A_Ne6td3A2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: CPSF_A_NECOD (1.6)
AMMS1_N_Ne6td3A1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_N_NECOD (1.6)
ACPSF_A_Ce6td3A3 A: alpha arraysX: HTHH: HTHT: tri-helicalF: CPSF_A_CECOD (1.6)
DCPSF_A_Ne6td3D2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: CPSF_A_NECOD (1.6)
DMMS1_N_Ne6td3D3 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_N_NECOD (1.6)
DCPSF_A_Ce6td3D1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: CPSF_A_CECOD (1.6)
GCPSF_A_Ne6td3G1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: CPSF_A_NECOD (1.6)
GMMS1_N_Ne6td3G3 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_N_NECOD (1.6)
GCPSF_A_Ce6td3G2 A: alpha arraysX: HTHH: HTHT: tri-helicalF: CPSF_A_CECOD (1.6)
BPkinase_Tyre6td3B1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: Pkinase_TyrECOD (1.6)
EPkinase_Tyre6td3E1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: Pkinase_TyrECOD (1.6)
HPkinase_Tyre6td3H1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: Pkinase_TyrECOD (1.6)
CCyclin_N_1e6td3C2 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: Cyclin_N_1ECOD (1.6)
FCyclin_N_1e6td3F1 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: Cyclin_N_1ECOD (1.6)
ICyclin_N_1e6td3I1 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: Cyclin_N_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.200.20 Alpha Beta 2-Layer Sandwich Phosphorylase Kinase domain 1CATH (utative)
B1.10.510.10 Mainly Alpha Orthogonal Bundle Transferase(Phosphotransferase) domain 1CATH (utative)
E3.30.200.20 Alpha Beta 2-Layer Sandwich Phosphorylase Kinase domain 1CATH (utative)
E1.10.510.10 Mainly Alpha Orthogonal Bundle Transferase(Phosphotransferase) domain 1CATH (utative)
H3.30.200.20 Alpha Beta 2-Layer Sandwich Phosphorylase Kinase domain 1CATH (utative)
H1.10.510.10 Mainly Alpha Orthogonal Bundle Transferase(Phosphotransferase) domain 1CATH (utative)
C1.10.472.10 Mainly Alpha Orthogonal Bundle Cyclin A domain 1CATH (utative)
F1.10.472.10 Mainly Alpha Orthogonal Bundle Cyclin A domain 1CATH (utative)
I1.10.472.10 Mainly Alpha Orthogonal Bundle Cyclin A domain 1CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, D, G
PF10433Mono-functional DNA-alkylating methyl methanesulfonate N-term (MMS1_N)Mono-functional DNA-alkylating methyl methanesulfonate N-term- Repeat
A, D, G
PF03178CPSF A subunit region (CPSF_A)CPSF A subunit region- Repeat
B, E, H
PF00069Protein kinase domain (Pkinase)Protein kinase domain- Domain
C, F, I
PF00134Cyclin, N-terminal domain (Cyclin_N)Cyclin, N-terminal domainCyclins regulate cyclin dependent kinases (CDKs). Swiss:P22674 is a Uracil-DNA glycosylase that is related to other cyclins [4]. Cyclins contain two domains of similar all-alpha fold, of which this family corresponds with the N-terminal domain.Domain
C, F, I
PF21797Cyclin-T2-like, C-terminal domain (CycT2-like_C)Cyclin-T2-like, C-terminal domainThis domain is found at the C-terminal end of human Cyclin-T2 (CycT2) and similar animal sequences. CycT2 is the regulatory subunit of the cyclin-dependent kinase pair (CDK9/cyclin T) complex, also called positive transcription elongation factor B (P ...This domain is found at the C-terminal end of human Cyclin-T2 (CycT2) and similar animal sequences. CycT2 is the regulatory subunit of the cyclin-dependent kinase pair (CDK9/cyclin T) complex, also called positive transcription elongation factor B (P-TEFB). This domain adopts s cyclin box fold consisting of five helices and a short C-terminal helix [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, D, G
DNA damage-binding protein 1
B, E, H
Cyclin-dependent kinase 12
C, F, I
Cyclin-K

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B, E, H
TPO Parent Component: THR

RESIDAA0038

PSI-MOD :  O-phospho-L-threonine MOD:00047