6X27

Lon protease proteolytic domain complexed with bortezomib


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad6x27a_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd6x27b_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd6x27d_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed6x27e_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id6x27i_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Jd6x27j_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Kd6x27k_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd6x27c_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd6x27f_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd6x27g_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd6x27h_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ld6x27l_ Alpha and beta proteins (a+b) Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
DSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
ESCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
ISCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
JSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
KSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
CSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
FSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
GSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
HSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)
LSCOP2B SuperfamilyRibosomal protein S5 domain 2-like8075401 3000100 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF05362e6x27A2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
APF05362e6x27A1 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
BPF05362e6x27B1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
BPF05362e6x27B2 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
DPF05362e6x27D1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
DPF05362e6x27D2 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
EPF05362e6x27E1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
EPF05362e6x27E2 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
IPF05362e6x27I1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
IPF05362e6x27I2 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
JPF05362e6x27J2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
JPF05362e6x27J1 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
KPF05362e6x27K2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
KPF05362e6x27K1 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
CPF05362e6x27C2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
CPF05362e6x27C1 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
FPF05362e6x27F1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
FPF05362e6x27F2 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
GPF05362e6x27G1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
GPF05362e6x27G2 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
HPF05362e6x27H2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
HPF05362e6x27H1 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)
LPF05362e6x27L1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF05362ECOD (1.6)
LPF05362e6x27L2 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: PF05362ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF05362Lon protease (S16) C-terminal proteolytic domain (Lon_C)Lon protease (S16) C-terminal proteolytic domainThe Lon serine proteases must hydrolyse ATP to degrade protein substrates. In Escherichia coli, these proteases are involved in turnover of intracellular proteins, including abnormal proteins following heat-shock. The active site for protease activit ...The Lon serine proteases must hydrolyse ATP to degrade protein substrates. In Escherichia coli, these proteases are involved in turnover of intracellular proteins, including abnormal proteins following heat-shock. The active site for protease activity resides in a C-terminal domain. The Lon proteases are classified as family S16 in Merops.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Lon protease homolog, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR015947PUA-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR046336Lon protease, N-terminal domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR003593AAA+ ATPase domainDomain
A, B, C, D, E
IPR027065Lon proteaseFamily
A, B, C, D, E
IPR008268Peptidase S16, active siteActive Site
A, B, C, D, E
IPR003959ATPase, AAA-type, coreDomain
A, B, C, D, E
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
A, B, C, D, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B, C, D, E
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
A, B, C, D, E
IPR003111Lon protease, N-terminal domainDomain
A, B, C, D, E
IPR004815Lon protease, bacterial/eukaryotic-typeFamily
A, B, C, D, E
IPR008269Peptidase S16, Lon proteolytic domainDomain
A, B, C, D, E
IPR027503Lon protease homologue, chloroplastic/mitochondrialFamily