Structure of the Escherichia coli methionyl-tRNA synthetase variant VI298 complexed with beta-methionine
External Resource: Annotation
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | Nucleotidylyl transferase | 8038698 | 3001541 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 8038697 | 3001786 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Nucleotidylyl transferase | 8038698 | 3001541 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Methionyl-tRNA synthetase (MetRS), Zn-domain | 8038699 | 3001215 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | Anticodon_1,tRNA-synt_1g | e6sprA3 | A: alpha bundles | X: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases (From Topology) | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases (From Topology) | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: Anticodon_1,tRNA-synt_1g | ECOD (1.6) |
A | tRNA-synt_1g | e6sprA1 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: tRNA-synt_1g | ECOD (1.6) |
A | tRNA-synt_1g_1 | e6sprA2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: tRNA-synt_1g_1 | ECOD (1.6) |
A | UNK_F_TYPE | e6sprA4 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: UNK_F_TYPE | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| Methionine--tRNA ligase | | | |
Chains | Accession | Name | Type |
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| IPR023458 | Methionine-tRNA ligase, type 1 | Family |
| IPR041872 | Methionyl-tRNA synthetase, anticodon-binding domain | Domain |
| IPR001412 | Aminoacyl-tRNA synthetase, class I, conserved site | Conserved Site |
| IPR002547 | tRNA-binding domain | Domain |
| IPR015413 | Methionyl/Leucyl tRNA synthetase | Domain |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | Homologous Superfamily |
| IPR004495 | Methionyl-tRNA synthetase, beta subunit, C-terminal | Domain |
| IPR014758 | Methionyl-tRNA synthetase | Family |
| IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |
| IPR009080 | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding | Homologous Superfamily |
| IPR033911 | Methioninyl-tRNA synthetase core domain | Domain |
| IPR029038 | Methionyl-tRNA synthetase, Zn-domain | Homologous Superfamily |