7K63
Cryo-EM structure of a chromatosome containing chimeric linker histone gH1.10-ncH1.4
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
M [auth U] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8070517 | 3000034 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Histone | e7k63A1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
E | Histone | e7k63E1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
C | Histone_1 | e7k63C1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
G | Histone_1 | e7k63G1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
D | Histone | e7k63D1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
H | Histone | e7k63H1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
M [auth U] | Linker_histone | e7k63U1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: Linker_histone | ECOD (1.6) |
B | Histone_1 | e7k63B1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
F | Histone_1 | e7k63F1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
K [auth M] | V-set | e7k63M2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
K [auth M] | V-set_10 | e7k63M1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_10 | ECOD (1.6) |
L [auth N] | V-set | e7k63N2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
L [auth N] | V-set_10 | e7k63N1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_10 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family | |
M [auth U] | PF00538 | linker histone H1 and H5 family (Linker_histone) | linker histone H1 and H5 family | Linker histone H1 is an essential component of chromatin structure. H1 links nucleosomes into higher order structures Histone H1 is replaced by histone H5 in some cell types. | Domain |
PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain | |