7KK6
Structure of the catalytic domain of PARP1 in complex with veliparib
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d7kk6a1 | All alpha proteins | Domain of poly(ADP-ribose) polymerase | Domain of poly(ADP-ribose) polymerase | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d7kk6a2 | Alpha and beta proteins (a+b) | ADP-ribosylation | ADP-ribosylation | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d7kk6a3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d7kk6b1 | All alpha proteins | Domain of poly(ADP-ribose) polymerase | Domain of poly(ADP-ribose) polymerase | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d7kk6b2 | Alpha and beta proteins (a+b) | ADP-ribosylation | ADP-ribosylation | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Domain of poly(ADP-ribose) polymerase | 8036812 | 3000280 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | ADP-ribosylation | 8036814 | 3001208 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | ADP-ribosylation | 8036814 | 3001208 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Domain of poly(ADP-ribose) polymerase | 8036812 | 3000280 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PARP_reg | e7kk6A1 | A: alpha bundles | X: Domain of poly(ADP-ribose) polymerase (From Topology) | H: Domain of poly(ADP-ribose) polymerase (From Topology) | T: Domain of poly(ADP-ribose) polymerase | F: PARP_reg | ECOD (1.6) |
A | PARP | e7kk6A2 | A: a+b complex topology | X: ADP-ribosylation (From Topology) | H: ADP-ribosylation (From Topology) | T: ADP-ribosylation | F: PARP | ECOD (1.6) |
B | PARP_reg | e7kk6B2 | A: alpha bundles | X: Domain of poly(ADP-ribose) polymerase (From Topology) | H: Domain of poly(ADP-ribose) polymerase (From Topology) | T: Domain of poly(ADP-ribose) polymerase | F: PARP_reg | ECOD (1.6) |
B | PARP | e7kk6B1 | A: a+b complex topology | X: ADP-ribosylation (From Topology) | H: ADP-ribosylation (From Topology) | T: ADP-ribosylation | F: PARP | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00644 | Poly(ADP-ribose) polymerase catalytic domain (PARP) | Poly(ADP-ribose) polymerase catalytic domain | - | Family | |
PF02877 | Poly(ADP-ribose) polymerase, regulatory domain (PARP_reg) | Poly(ADP-ribose) polymerase, regulatory domain | Poly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038650 | PADR1, C-terminal domain superfamily | Homologous Superfamily | |
IPR050800 | ADP-ribosyltransferase diphtheria toxin-like | Family | |
IPR001510 | Zinc finger, PARP-type | Domain | |
IPR012982 | PARP1-like, PADR1 domain, zinc ribbon fold | Domain | |
IPR049296 | PARP1-like, PADR1 domain, N-terminal helical subdomain | Domain | |
IPR012317 | Poly(ADP-ribose) polymerase, catalytic domain | Domain | |
IPR036957 | Zinc finger, PARP-type superfamily | Homologous Superfamily | |
IPR001357 | BRCT domain | Domain | |
IPR036930 | WGR domain superfamily | Homologous Superfamily | |
IPR008893 | WGR domain | Domain | |
IPR036420 | BRCT domain superfamily | Homologous Superfamily | |
IPR036616 | Poly(ADP-ribose) polymerase, regulatory domain superfamily | Homologous Superfamily | |
IPR004102 | Poly(ADP-ribose) polymerase, regulatory domain | Domain | |
IPR008288 | Poly [ADP-ribose] polymerase | Family |