8FDW
Cryo-EM structure of SARS-CoV-2 postfusion spike in membrane
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Coronavirus spike S2 glycoprotein connector domain-like | 8092473 | 3002562 | SCOP2B (2021-05-27) |
A [auth B] | SCOP2B Superfamily | Coronavirus S2 glycoprotein stalk-like | 8092471 | 3000282 | SCOP2B (2021-05-27) |
B [auth A] | SCOP2B Superfamily | Coronavirus spike S2 glycoprotein connector domain-like | 8092473 | 3002562 | SCOP2B (2021-05-27) |
B [auth A] | SCOP2B Superfamily | Coronavirus S2 glycoprotein stalk-like | 8092471 | 3000282 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Coronavirus S2 glycoprotein stalk-like | 8092471 | 3000282 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Coronavirus spike S2 glycoprotein connector domain-like | 8092473 | 3002562 | SCOP2B (2021-05-27) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A], C | PF01601 | Coronavirus spike glycoprotein S2 (CoV_S2) | Coronavirus spike glycoprotein S2 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Bitopic proteins | Viral membrane fusion glycoprotein | Spike glycoprotein, betacoronavirus |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |