X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.0238.48

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 52.42α = 90
b = 65.37β = 98.18
c = 126.02γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42003-05-31MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPHOTON FACTORY BEAMLINE BL-6A1.00000Photon FactoryBL-6A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.726.29282892828
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.71.79100

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSIRASTHROUGHOUT1.726.1788165464299.940.1670.1670.165190.20116RANDOM13.29
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.390.640.64-0.07
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.58
r_scangle_it3.215
r_scbond_it2.006
r_mcangle_it1.485
r_angle_refined_deg1.365
r_mcbond_it0.837
r_angle_other_deg0.79
r_symmetry_vdw_other0.331
r_nbd_other0.252
r_metal_ion_refined0.215
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.58
r_scangle_it3.215
r_scbond_it2.006
r_mcangle_it1.485
r_angle_refined_deg1.365
r_mcbond_it0.837
r_angle_other_deg0.79
r_symmetry_vdw_other0.331
r_nbd_other0.252
r_metal_ion_refined0.215
r_nbd_refined0.198
r_symmetry_hbond_refined0.165
r_xyhbond_nbd_refined0.158
r_symmetry_vdw_refined0.085
r_chiral_restr0.084
r_nbtor_other0.082
r_bond_refined_d0.011
r_gen_planes_refined0.005
r_bond_other_d0.002
r_gen_planes_other0.002
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_other
r_symmetry_hbond_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6626
Nucleic Acid Atoms
Solvent Atoms846
Heterogen Atoms30

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling
SHARPphasing