X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.5150.91

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 68.43α = 90
b = 104.8β = 90
c = 119.11γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2005-01-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X122.00EMBL/DESY, HamburgX12

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.33035381

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT2.3303465972291.250.297310.295970.35933RANDOM36.847
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.062.82-1.76
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.257
r_dihedral_angle_4_deg32.394
r_dihedral_angle_3_deg19.183
r_dihedral_angle_1_deg8.834
r_scangle_it6.844
r_scbond_it4.987
r_angle_refined_deg2.053
r_mcangle_it1.939
r_angle_other_deg1.174
r_mcbond_it1.031
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.257
r_dihedral_angle_4_deg32.394
r_dihedral_angle_3_deg19.183
r_dihedral_angle_1_deg8.834
r_scangle_it6.844
r_scbond_it4.987
r_angle_refined_deg2.053
r_mcangle_it1.939
r_angle_other_deg1.174
r_mcbond_it1.031
r_symmetry_vdw_refined0.36
r_mcbond_other0.287
r_nbd_refined0.251
r_symmetry_vdw_other0.249
r_symmetry_metal_ion_refined0.248
r_symmetry_hbond_refined0.234
r_metal_ion_refined0.197
r_nbd_other0.188
r_nbtor_refined0.185
r_xyhbond_nbd_refined0.183
r_xyhbond_nbd_other0.152
r_chiral_restr0.138
r_nbtor_other0.098
r_bond_refined_d0.029
r_bond_other_d0.012
r_gen_planes_refined0.008
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5856
Nucleic Acid Atoms
Solvent Atoms74
Heterogen Atoms8

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
CCP4data scaling
FFTphasing