2GRI
NMR Structure of the SARS-CoV non-structural protein nsp3a
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 1-2.5 mM nsp3a(1-112) 15N,13C; 50 mM phosphate buffer, pH 6.5, 150mM NaCl; 90% H2O, 10% D2O | 90% H2O/10% D2O | 150 mM NaCl, 50 mM sodium phosphate | 6.5 | ambient | 298 | |
2 | 3D_15N-separated_NOESY | 1-2.5 mM nsp3a(1-112) 15N,13C; 50 mM phosphate buffer, pH 6.5, 150mM NaCl; 90% H2O, 10% D2O | 90% H2O/10% D2O | 150 mM NaCl, 50 mM sodium phosphate | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | DRX | 750 |
3 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | TopSpin |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 80 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | 1.3 | |
2 | processing | TopSpin | 1.3 | |
3 | structure solution | ATNOS/CANDID/CYANA | 1.0 | Herrmann |
4 | data analysis | CARA | 1.4 | Keller |
5 | refinement | OPALp | 1.0 | Gunterd |