X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.8356.46

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 55.585α = 90
b = 55.585β = 90
c = 143.577γ = 120
Symmetry
Space GroupP 32 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray2004-04-29MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X9A0.979NSLSX9A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.484094.30.08115.44.441183
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.481.53620.3342.25136

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.54041134206397.720.1580.1570.1560.203RANDOM21.551
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.60.30.6-0.89
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.71
r_dihedral_angle_4_deg18.893
r_dihedral_angle_3_deg13.119
r_dihedral_angle_1_deg6.102
r_scangle_it5.656
r_scbond_it4.566
r_mcangle_it2.583
r_mcbond_it2.236
r_angle_refined_deg1.69
r_mcbond_other1.208
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.71
r_dihedral_angle_4_deg18.893
r_dihedral_angle_3_deg13.119
r_dihedral_angle_1_deg6.102
r_scangle_it5.656
r_scbond_it4.566
r_mcangle_it2.583
r_mcbond_it2.236
r_angle_refined_deg1.69
r_mcbond_other1.208
r_angle_other_deg0.898
r_symmetry_vdw_refined0.461
r_symmetry_hbond_refined0.238
r_nbd_refined0.222
r_nbd_other0.204
r_nbtor_refined0.187
r_symmetry_vdw_other0.181
r_xyhbond_nbd_refined0.178
r_chiral_restr0.141
r_nbtor_other0.089
r_bond_refined_d0.02
r_gen_planes_refined0.008
r_bond_other_d0.003
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1592
Nucleic Acid Atoms
Solvent Atoms323
Heterogen Atoms10

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction