SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.3 mM [U-99% 15N] cbm | 95% H2O/5% D2O | 70 | 7.2 | ambient | 293 | |
2 | 3D HNCACB | 0.3 mM [U-100% 13C; U-100% 15N] cbm | 95% H2O/5% D2O | 70 | 7.2 | ambient | 293 | |
3 | 3D CBCA(CO)NH | 0.3 mM [U-100% 13C; U-100% 15N] cbm | 95% H2O/5% D2O | 70 | 7.2 | ambient | 293 | |
4 | 2D 1H-13C HSQC | 0.3 mM [U-100% 13C; U-100% 15N] cbm | 95% H2O/5% D2O | 70 | 7.2 | ambient | 293 | |
5 | 3D HCCH-TOCSY | 0.3 mM [U-100% 13C; U-100% 15N] cbm | 100% D2O | 70 | 7.2 | ambient | 293 | |
6 | 3D 1H-13C NOESY | 0.3 mM [U-100% 13C; U-100% 15N] cbm | 100% D2O | 70 | 7.2 | ambient | 293 | |
7 | 3D 1H-15N NOESY | 0.3 mM [U-99% 15N] cbm | 95% H2O/5% D2O | 70 | 7.2 | ambient | 293 | |
8 | 3D 1H-15N TOCSY | 0.3 mM [U-99% 15N] cbm | 95% H2O/5% D2O | 70 | 7.2 | ambient | 293 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics, molecular dynamics | NMRPipe |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
2 | chemical shift assignment | NMRView | 5 | Johnson, One Moon Scientific |
3 | chemical shift calculation | NMRView | 5 | Johnson, One Moon Scientific |
4 | peak picking | NMRView | 5 | Johnson, One Moon Scientific |
5 | structure solution | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
6 | refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read | |
7 | refinement | CYANA |