X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP929525% PEG 3350, 0.1 M Tris, pH 9, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
2.0640.37

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 98.06α = 90
b = 98.06β = 90
c = 154.15γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCDMIRROR2010-08-13MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-G0.97856APS21-ID-G

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.6525.299.90.09114.7112.6172747172747-324.2
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.651.6899.80.4993.16119026

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.6525.228610486104454499.870.164160.162650.1927RANDOM12.396
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.31-0.310.62
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.64
r_dihedral_angle_4_deg21.185
r_dihedral_angle_3_deg12.299
r_dihedral_angle_1_deg5.812
r_scangle_it4.425
r_scbond_it2.902
r_mcangle_it1.64
r_angle_refined_deg1.537
r_angle_other_deg0.986
r_mcbond_it0.923
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.64
r_dihedral_angle_4_deg21.185
r_dihedral_angle_3_deg12.299
r_dihedral_angle_1_deg5.812
r_scangle_it4.425
r_scbond_it2.902
r_mcangle_it1.64
r_angle_refined_deg1.537
r_angle_other_deg0.986
r_mcbond_it0.923
r_mcbond_other0.271
r_chiral_restr0.094
r_bond_refined_d0.017
r_gen_planes_refined0.007
r_gen_planes_other0.002
r_bond_other_d0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6168
Nucleic Acid Atoms
Solvent Atoms601
Heterogen Atoms30

Software

Software
Software NamePurpose
Blu-Icedata collection
CCP4model building
MrBUMPphasing
PHENIXmodel building
REFMACrefinement
XSCALEdata scaling
CCP4phasing
PHENIXphasing