X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
152.2 M NACL, 0.1 M CITRIC ACID/NAOH PH 5.0
Crystal Properties
Matthews coefficientSolvent content
3.4464.28

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 136.334α = 90
b = 136.334β = 90
c = 144.202γ = 90
Symmetry
Space GroupI 4 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6M2013-02-17MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X10SASLSX10SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.9245.3398.50.0820.0610.5949737-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.922.0490.81.212.188.35

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSIRASTHROUGHOUTNONE1.9245.3746150471398.460.157340.153140.19827RANDOM39.118
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.350.35-0.71
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.771
r_sphericity_free29.515
r_sphericity_bonded18.709
r_dihedral_angle_4_deg13.897
r_dihedral_angle_3_deg12.919
r_dihedral_angle_1_deg5.933
r_scbond_it3.179
r_mcangle_it2.569
r_mcbond_it1.873
r_angle_refined_deg1.268
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.771
r_sphericity_free29.515
r_sphericity_bonded18.709
r_dihedral_angle_4_deg13.897
r_dihedral_angle_3_deg12.919
r_dihedral_angle_1_deg5.933
r_scbond_it3.179
r_mcangle_it2.569
r_mcbond_it1.873
r_angle_refined_deg1.268
r_rigid_bond_restr0.988
r_chiral_restr0.078
r_bond_refined_d0.007
r_gen_planes_refined0.004
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_it
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3404
Nucleic Acid Atoms
Solvent Atoms238
Heterogen Atoms76

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XDSdata scaling
SHELXDphasing
SHARPphasing
RESOLVEphasing