X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.52770.1 M Tris, pH 7.5, 0.2 M NaCl, 14% w/v polyethylene glycol 3350
Crystal Properties
Matthews coefficientSolvent content
2.2745.81

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 76.763α = 90
b = 152.573β = 97.88
c = 94.405γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDBruker DIP-60402017-07-16MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSRRC BEAMLINE BL13B11.0NSRRCBL13B1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.123099.826.124.3121473
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.122.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.1229.96114970612899.540.194890.191940.25071RANDOM33.386
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.270.01-0.13-0.14
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.649
r_dihedral_angle_4_deg20.066
r_dihedral_angle_3_deg17.925
r_long_range_B_refined7.099
r_long_range_B_other7.099
r_dihedral_angle_1_deg6.927
r_scangle_other4.992
r_mcangle_it4.173
r_mcangle_other4.173
r_scbond_it3.16
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.649
r_dihedral_angle_4_deg20.066
r_dihedral_angle_3_deg17.925
r_long_range_B_refined7.099
r_long_range_B_other7.099
r_dihedral_angle_1_deg6.927
r_scangle_other4.992
r_mcangle_it4.173
r_mcangle_other4.173
r_scbond_it3.16
r_scbond_other3.16
r_mcbond_it2.676
r_mcbond_other2.676
r_angle_refined_deg1.405
r_angle_other_deg0.922
r_chiral_restr0.068
r_bond_refined_d0.011
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms15947
Nucleic Acid Atoms
Solvent Atoms488
Heterogen Atoms43

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
MOLREPphasing