7QU7

ATAD2 in complex with FragLite16

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	6.5	293	0.1M BisTris pH 6-7, 1.7-2.1M Ammonium sulphate

Crystal Properties
Matthews coefficient	Solvent content
3.97	69.04

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 78.783	α = 90
b = 78.783	β = 90
c = 137.078	γ = 120

Symmetry
Space Group	P 65 2 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M		2019-10-18	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	DIAMOND BEAMLINE I04	0.898	Diamond	I04

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.13	68.321	100	0.194	0.198	0.043	1	17.6	38.9		14759

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.13	2.19			6.584	6.739	1.435	0.365		41

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	3DAI	2.13	68.321	14706	738	99.966	0.221	0.2183	0.2806	59.121

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-1.073	-0.537		-1.073		3.482

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	32.048
r_dihedral_angle_4_deg	19.885
r_dihedral_angle_3_deg	16.717
r_lrange_it	12.319
r_lrange_other	12.315
r_scangle_other	9.446
r_scangle_it	9.445
r_mcangle_it	6.47
r_mcangle_other	6.468
r_scbond_it	6.381
r_scbond_other	6.378
r_dihedral_angle_1_deg	6.169
r_mcbond_it	4.585
r_mcbond_other	4.561
r_angle_refined_deg	1.556
r_angle_other_deg	1.367
r_nbd_other	0.285
r_symmetry_nbd_refined	0.247
r_xyhbond_nbd_refined	0.226
r_symmetry_xyhbond_nbd_refined	0.223
r_nbd_refined	0.216
r_symmetry_nbd_other	0.186
r_nbtor_refined	0.175
r_symmetry_xyhbond_nbd_other	0.102
r_symmetry_nbtor_other	0.081
r_chiral_restr	0.072
r_xyhbond_nbd_other	0.064
r_bond_refined_d	0.01
r_gen_planes_refined	0.007
r_gen_planes_other	0.002
r_bond_other_d	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	1084
Nucleic Acid Atoms
Solvent Atoms	57
Heterogen Atoms	38

Software

Software
Software Name	Purpose
REFMAC	refinement
REFMAC	refinement
Aimless	data scaling
xia2	data reduction
XDS	data scaling
PHASER	phasing