UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 1GX4 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1GX4_UDP_B_401 100% 27% 0.047 0.9921.85 1.09 3 400100%1
1GX4_UDP_A_401 100% 32% 0.046 0.9911.68 1.03 2 300100%1
2WGZ_UDP_A_1401 96% 37% 0.075 0.9860.94 1.5 1 500100%1
1GWW_UDP_B_1369 92% 41% 0.077 0.9671.26 1.04 3 200100%1
2VS3_UDP_A_401 91% 36% 0.09 0.9780.95 1.54 - 500100%1
1GX0_UDP_A_1369 90% 22% 0.084 0.9682.06 1.18 4 400100%1
2JCK_UDP_A_3361 90% 9% 0.088 0.9692.79 1.77 9 800100%1
8X3Q_UDP_C_401 100% 3% 0.015 0.9983.32 2.69 13 1300100%1
8X3U_UDP_B_401 100% 3% 0.012 0.9993.31 2.68 13 1320100%1
8VH8_UDP_C_704 100% 62% 0.032 0.9950.55 0.9 - 100100%1
2B69_UDP_A_900 100% 42% 0.032 0.9921.03 1.21 2 400100%1
4GYW_UDP_C_1101 100% 37% 0.037 0.9881.03 1.45 2 400100%1