Ligand validation:1Q84

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 1Q84 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
1Q84_NAG_A_1501	7%	24%	0.389	0.857	1.15	1.95	1	4	0	0	100%	0.9333
1Q84_NAG_A_1701	4%	36%	0.418	0.806	0.75	1.73	-	5	0	0	100%	0.9333
2WHP_NAG_A_601	47%	54%	0.171	0.909	0.43	1.31	-	2	0	0	100%	0.6533
5EHQ_NAG_A_1503	34%	69%	0.19	0.871	0.41	0.79	-	1	0	0	100%	0.9333
5FKJ_NAG_D_560	26%	70%	0.18	0.821	0.53	0.62	-	1	0	0	100%	0.84
4A16_NAG_B_1546	25%	14%	0.167	0.816	1.18	2.66	1	7	5	0	93%	0.9333
4BC1_NAG_B_701	21%	45%	0.179	0.79	0.47	1.62	-	3	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.