NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 1RD8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1RD8_NAG_A_1 | 10% | 24% | 0.205 | 0.714 | 1.08 | 2.03 | 1 | 6 | 0 | 1 | 100% | 0.9333 |
1RD8_NAG_C_330 | 7% | 24% | 0.208 | 0.654 | 1.09 | 2 | 1 | 6 | 0 | 1 | 100% | 0.9333 |
1RD8_NAG_A_2 | 5% | 43% | 0.226 | 0.644 | 0.57 | 1.6 | - | 3 | 0 | 1 | 100% | 0.9333 |
1RD8_NAG_B_183 | 5% | 45% | 0.228 | 0.631 | 0.56 | 1.53 | - | 4 | 2 | 1 | 100% | 0.9333 |
1RD8_NAG_E_330 | 2% | 12% | 0.242 | 0.502 | 1.49 | 2.59 | 3 | 7 | 0 | 1 | 100% | 0.9333 |
1RD8_NAG_C_335 | 1% | 47% | 0.29 | 0.496 | 0.74 | 1.28 | - | 2 | 0 | 0 | 100% | 0.9333 |
2WRG_NAG_J_1328 | 73% | 24% | 0.091 | 0.918 | 0.64 | 2.44 | - | 6 | 3 | 0 | 100% | 1 |
3GBN_NAG_A_330 | 37% | 45% | 0.206 | 0.904 | 0.72 | 1.4 | 1 | 1 | 1 | 0 | 100% | 0.9333 |
4PY8_NAG_A_401 | 28% | 45% | 0.118 | 0.766 | 0.7 | 1.39 | - | 2 | 0 | 0 | 100% | 0.9333 |
4GXU_NAG_G_401 | 22% | 63% | 0.188 | 0.806 | 0.66 | 0.77 | - | - | 0 | 0 | 100% | 0.9333 |
3HTO_NAG_A_633 | 14% | 61% | 0.279 | 0.831 | 0.74 | 0.76 | - | - | 0 | 0 | 100% | 0.9333 |
3H0C_NAG_A_794 | 100% | 56% | 0.021 | 0.995 | 0.61 | 1.08 | - | 1 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3GXM_NAG_A_498 | 100% | 45% | 0.026 | 0.992 | 0.75 | 1.34 | - | 2 | 0 | 0 | 100% | 0.9333 |