PDC: PYRIDINE-2,6-DICARBOXYLIC ACID
PDC is a Ligand Of Interest in 2PC2 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2PC2_PDC_A_303 | 99% | 40% | 0.042 | 0.979 | 0.8 | 1.51 | - | 5 | 0 | 0 | 100% | 0.88 |
2PC2_PDC_A_302 | 99% | 40% | 0.044 | 0.975 | 0.94 | 1.37 | 1 | 2 | 0 | 0 | 100% | 0.88 |
2PC2_PDC_A_304 | 92% | 29% | 0.062 | 0.953 | 0.94 | 1.86 | 1 | 5 | 0 | 0 | 100% | 0.88 |
2PC2_PDC_A_402 | 82% | 38% | 0.067 | 0.922 | 0.85 | 1.57 | - | 5 | 0 | 0 | 100% | 0.44 |
2PC2_PDC_A_403 | 73% | 37% | 0.076 | 0.903 | 0.85 | 1.58 | - | 5 | 1 | 0 | 100% | 0.44 |
2PC2_PDC_A_404 | 72% | 38% | 0.078 | 0.899 | 0.84 | 1.57 | - | 5 | 1 | 0 | 100% | 0.44 |
2PC2_PDC_A_502 | 55% | 30% | 0.106 | 0.873 | 1.1 | 1.68 | 1 | 4 | 0 | 0 | 100% | 0.62 |
2PC2_PDC_A_503 | 37% | 28% | 0.123 | 0.82 | 1.21 | 1.67 | 2 | 6 | 0 | 0 | 100% | 0.62 |
2PC2_PDC_A_504 | 35% | 25% | 0.124 | 0.808 | 1.1 | 1.93 | 1 | 6 | 0 | 0 | 100% | 0.62 |
2PC2_PDC_A_602 | 21% | 25% | 0.167 | 0.776 | 0.95 | 2.05 | - | 6 | 0 | 0 | 100% | 0.39 |
2PC2_PDC_A_603 | 19% | 41% | 0.155 | 0.748 | 0.89 | 1.41 | - | 3 | 0 | 0 | 100% | 0.39 |
2PC2_PDC_A_604 | 15% | 33% | 0.151 | 0.708 | 0.99 | 1.66 | 1 | 4 | 0 | 0 | 100% | 0.39 |
2PC2_PDC_A_702 | 4% | 26% | 0.229 | 0.593 | 0.9 | 2.05 | - | 6 | 0 | 0 | 100% | 0.36 |
3LGR_PDC_A_304 | 100% | 3% | 0.041 | 0.984 | 2.77 | 3.13 | 6 | 11 | 0 | 0 | 100% | 0.5 |
8S3A_PDC_F_601 | 99% | 50% | 0.043 | 0.977 | 0.97 | 0.97 | - | - | 0 | 0 | 100% | 1 |
5TJZ_PDC_A_301 | 95% | 32% | 0.072 | 0.977 | 1.27 | 1.41 | 1 | 3 | 1 | 0 | 100% | 1 |
1ARZ_PDC_B_303 | 95% | 2% | 0.077 | 0.98 | 5.58 | 1.09 | 7 | 1 | 1 | 0 | 100% | 1 |
1P9L_PDC_B_402 | 89% | 2% | 0.086 | 0.964 | 4.67 | 1.85 | 7 | 5 | 0 | 0 | 100% | 1 |