U5P: URIDINE-5'-MONOPHOSPHATE
U5P is a Ligand Of Interest in 2QAF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2QAF_U5P_B_3000 | 92% | 18% | 0.089 | 0.979 | 1.26 | 2.22 | 4 | 11 | 0 | 0 | 100% | 1 |
| 2QAF_U5P_A_3000 | 84% | 23% | 0.118 | 0.982 | 1.13 | 2.01 | 3 | 12 | 0 | 0 | 100% | 1 |
| 3BAR_U5P_B_3000 | 94% | 16% | 0.078 | 0.975 | 2.08 | 1.63 | 7 | 8 | 0 | 0 | 100% | 1 |
| 6DSR_U5P_B_401 | 79% | 7% | 0.121 | 0.967 | 3.2 | 1.65 | 7 | 6 | 2 | 0 | 100% | 1 |
| 6DSS_U5P_B_600 | 72% | 26% | 0.135 | 0.958 | 1.42 | 1.58 | 4 | 6 | 0 | 0 | 100% | 1 |
| 2ZA3_U5P_A_500 | 53% | 34% | 0.187 | 0.948 | 0.8 | 1.78 | - | 8 | 1 | 0 | 100% | 1 |
| 3G1X_U5P_A_229 | 100% | 48% | 0.021 | 0.996 | 1.08 | 0.92 | 1 | 2 | 0 | 0 | 100% | 1 |
| 6YWU_U5P_A_501 | 100% | 40% | 0.036 | 0.994 | 1.2 | 1.13 | 2 | 1 | 0 | 0 | 100% | 1 |
| 2E6Y_U5P_B_302 | 100% | 49% | 0.04 | 0.993 | 1.11 | 0.85 | 1 | 1 | 1 | 0 | 100% | 1 |
| 6ZWY_U5P_A_501 | 100% | 44% | 0.048 | 0.994 | 0.99 | 1.17 | 1 | 1 | 0 | 0 | 100% | 1 |
| 3G22_U5P_B_229 | 99% | 49% | 0.042 | 0.98 | 1.08 | 0.91 | 2 | 2 | 0 | 0 | 100% | 1 |
