D5M: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
D5M is a Ligand Of Interest in 2QRO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2QRO_D5M_A_503 | 59% | 32% | 0.174 | 0.958 | 0.93 | 1.73 | 1 | 4 | 6 | 0 | 100% | 1 |
| 2QRO_D5M_D_503 | 59% | 33% | 0.162 | 0.945 | 0.97 | 1.64 | 2 | 4 | 4 | 0 | 100% | 1 |
| 2QRO_D5M_C_503 | 47% | 32% | 0.19 | 0.93 | 1.03 | 1.65 | 3 | 4 | 6 | 0 | 100% | 1 |
| 2QRO_D5M_B_503 | 43% | 30% | 0.204 | 0.927 | 1.03 | 1.76 | 3 | 4 | 3 | 0 | 100% | 1 |
| 6B42_D5M_A_201 | 98% | 52% | 0.066 | 0.986 | 0.82 | 1.04 | 1 | 2 | 0 | 0 | 100% | 1 |
| 8HCG_D5M_A_306 | 95% | 32% | 0.078 | 0.982 | 1.69 | 1.02 | 7 | 1 | 0 | 0 | 100% | 1 |
| 8PUU_D5M_B_301 | 92% | 4% | 0.077 | 0.968 | 4.14 | 1.46 | 8 | 2 | 0 | 0 | 100% | 1 |
| 6JNL_D5M_C_101 | 89% | 60% | 0.09 | 0.977 | 0.72 | 0.82 | - | 1 | 0 | 0 | 95% | 0.9545 |
| 2IOC_D5M_B_303 | 88% | 11% | 0.07 | 0.945 | 2.81 | 1.38 | 2 | 1 | 0 | 0 | 100% | 1 |
