NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 2Y1K designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2Y1K_NAG_A_612 | 43% | 47% | 0.172 | 0.906 | 0.59 | 1.45 | - | 4 | 5 | 0 | 93% | 0.9333 |
2Y1K_NAG_A_609 | 36% | 41% | 0.186 | 0.891 | 0.62 | 1.63 | - | 3 | 4 | 0 | 93% | 0.9333 |
2Y1K_NAG_A_615 | 33% | 7% | 0.178 | 0.866 | 0.92 | 3.87 | 1 | 10 | 6 | 0 | 93% | 0.9333 |
2Y1K_NAG_A_614 | 14% | 44% | 0.331 | 0.896 | 0.47 | 1.65 | - | 5 | 2 | 0 | 93% | 0.9333 |
2Y1K_NAG_A_616 | 5% | 31% | 0.36 | 0.789 | 0.86 | 1.85 | - | 4 | 2 | 0 | 93% | 0.9333 |
2Y1K_NAG_A_618 | 1% | 44% | 0.555 | 0.734 | 0.7 | 1.45 | - | 4 | 1 | 0 | 93% | 0.9333 |
2Y1K_NAG_A_617 | 1% | 40% | 0.532 | 0.658 | 0.67 | 1.64 | - | 4 | 2 | 0 | 93% | 0.9333 |
5LKR_NAG_B_608 | 57% | 68% | 0.094 | 0.869 | 0.56 | 0.67 | - | 1 | 0 | 0 | 100% | 0.9333 |
5DYW_NAG_A_625 | 55% | 54% | 0.134 | 0.9 | 0.64 | 1.11 | 1 | 1 | 0 | 1 | 100% | 0.9333 |
6F7Q_NAG_B_611 | 51% | 56% | 0.137 | 0.89 | 0.82 | 0.89 | 1 | 1 | 0 | 0 | 100% | 0.896 |
7Q1P_NAG_A_603 | 49% | 45% | 0.122 | 0.867 | 1.1 | 1.03 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
1P0I_NAG_A_538 | 48% | 58% | 0.135 | 0.877 | 0.77 | 0.83 | - | - | 0 | 0 | 100% | 0.6667 |
3H0C_NAG_A_794 | 100% | 56% | 0.021 | 0.995 | 0.61 | 1.08 | - | 1 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3GXM_NAG_A_498 | 100% | 45% | 0.026 | 0.992 | 0.75 | 1.34 | - | 2 | 0 | 0 | 100% | 0.9333 |