Ligand validation:2AKR

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2AKR designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2AKR_NAG_C_501	93%	44%	0.072	0.967	0.79	1.35	-	2	0	0	100%	0.9333
2AKR_NAG_A_501	90%	43%	0.074	0.958	0.66	1.51	-	2	0	0	100%	0.9333
2AKR_NAG_A_511	83%	41%	0.085	0.944	0.82	1.44	-	1	0	0	100%	0.9333
2AKR_NAG_C_500	69%	50%	0.113	0.926	0.83	1.11	1	-	4	0	100%	0.9333
2AKR_NAG_A_500	30%	30%	0.19	0.851	0.73	2.03	-	4	0	0	100%	0.9333
2Q7Y_NAG_C_501	91%	50%	0.086	0.971	0.66	1.26	-	2	0	0	100%	0.9333
3RUG_NAG_A_307	79%	54%	0.103	0.948	0.43	1.32	-	1	0	0	100%	0.9333
6CXE_NAG_A_302	73%	49%	0.098	0.924	0.75	1.2	-	1	0	0	100%	0.9333
6C6J_NAG_A_302	71%	72%	0.103	0.924	0.24	0.84	-	-	0	0	100%	0.9333
3T1F_NAG_A_501	71%	59%	0.108	0.929	0.61	0.97	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.